| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2871 |
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| Symbol | ispF |
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| ID | 6145232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2944499 |
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| End bp | 2944978 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617740 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001744895 |
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| Protein GI | 170680373 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATTG GACACGGTTT TGACGTACAC GCCTTTGGCG GTGAAGGCCC AATTATCATT
GGTGGCGTGC GCATTCCTTA CGAAAAAGGG CTGCTGGCGC ATTCTGATGG CGACGTGGCG
CTCCATGCGT TGACCGATGC ATTGCTTGGC GCGGCGGCGC TGGGGGATAT CGGCAAACTG
TTCCCGGATA CCGATCCGGC ATTTAAAGGT GCCGACAGCC GCGAGCTGTT GCGCGAAGCC
TGGCGTCGTA TTCAGGCGAA AGGTTATGCC CTCGGCAACG TCGATGTCAC TATCATCGCT
CAGGCACCGA AGATGTTGCC GCACATTCCA CAAATGCGCG TGTTTATTGC CGAAGATCTC
GGCTGCCATA TGGATGATGT TAACGTGAAA GCCACTACTA CGGAAAAACT GGGATTTACC
GGACGTGGGG AAGGGATTGC CTGTGAAGCG GTGGCGCTAC TCATTAAGGC AACGAAATGA
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| Protein sequence | MRIGHGFDVH AFGGEGPIII GGVRIPYEKG LLAHSDGDVA LHALTDALLG AAALGDIGKL
FPDTDPAFKG ADSRELLREA WRRIQAKGYA LGNVDVTIIA QAPKMLPHIP QMRVFIAEDL
GCHMDDVNVK ATTTEKLGFT GRGEGIACEA VALLIKATK
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