| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2867 |
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| Symbol | nlpD |
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| ID | 6143460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2940812 |
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| End bp | 2941951 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617736 |
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| Product | lipoprotein NlpD |
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| Protein accession | YP_001744891 |
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| Protein GI | 170679671 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG GAAGCCCAAA ATTCACCGTT CGCCGCATTG CGGCTTTGTC ACTGGTTTCG
CTATGGCTGG CAGGCTGTTC TGACACTTCA AATCCACCGG CCCCGGTCAG CTCCGTTAAT
GGCAATGCGC CTGCAAATAC CAATTCTGGT ATGTTGATTA CGCCGCCGCC GAAAATGGGG
ACGACGTCTA CAGCGCAGCA ACCGCAAATT CAGCCGGTAC AGCAGCCACA AATTCAGGCC
ACTCAACAAC CGCAAATCCA GCCGGTGCAG CCAGTAGCTC AGCAGCCGGT ACAGATGGAA
AACGGACGCA TCGTCTATAA CCGTCAGTAT GGGAACATTC CGAAAGGCAG TTATAGCGGC
AGTACCTATA CAGTGAAAAA AGGCGACACA CTTTTCTATA TCGCCTGGAT TACTGGCAAC
GATTTCCGTG ACCTTGCTCA GCGCAACAAT ATTCAGGCAC CATATGCGCT GAACGTCGGT
CAGACCTTAC AGGTGGGGAA TGCTTCCGGT ACGCCAATCA CTGGCGGAAA TGCCATTACC
CAGGCCGACG CAGCAGAGCA AGGAGTTGTG ATCAAGCCTG CACAAAATTC CACCGTTGCT
GTTGCTTCGC AACCGACAAT TACGTATTCT GAGTCTTCGG GTGAACAGAG TGCTAACAAA
ATGTTGCCGA ACAACAAGCC AACTGCGACC ACGGTCACAG CGCCTGTAAC GGTACCAACA
GCAAGCACAA CCGAGCCGAC TGTCAGCAGT ACATCAACCA GTACGCCTAT CTCCACCTGG
CGCTGGCCGA CTGAGGGCAA AGTGATCGAA ACCTTTGGCG CTTCTGAGGG GGGCAACAAG
GGGATTGATA TCGCAGGCAG CAAAGGACAG GCAATTATCG CGACTGCAGA TGGCCGCGTT
GTTTATGCCG GTAACGCGCT GCGCGGCTAC GGTAATCTGA TTATCATCAA ACATAATGAT
GATTACCTGA GTGCCTACGC CCATAACGAC ACAATGCTGG TCCGGGAACA ACAAGAAGTG
AAGGCGGGGC AAAAAATAGC AACCATGGGT AGCACCGGAA CCAGTTCAAC ACGCTTGCAT
TTTGAAATTC GTTACAAGGG GAAATCCGTA AACCCGCTGC GTTATTTGCC GCAGCGATAA
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| Protein sequence | MSAGSPKFTV RRIAALSLVS LWLAGCSDTS NPPAPVSSVN GNAPANTNSG MLITPPPKMG
TTSTAQQPQI QPVQQPQIQA TQQPQIQPVQ PVAQQPVQME NGRIVYNRQY GNIPKGSYSG
STYTVKKGDT LFYIAWITGN DFRDLAQRNN IQAPYALNVG QTLQVGNASG TPITGGNAIT
QADAAEQGVV IKPAQNSTVA VASQPTITYS ESSGEQSANK MLPNNKPTAT TVTAPVTVPT
ASTTEPTVSS TSTSTPISTW RWPTEGKVIE TFGASEGGNK GIDIAGSKGQ AIIATADGRV
VYAGNALRGY GNLIIIKHND DYLSAYAHND TMLVREQQEV KAGQKIATMG STGTSSTRLH
FEIRYKGKSV NPLRYLPQR
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