| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2855 |
|---|
| Symbol | hypE |
|---|
| ID | 6145066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2929146 |
|---|
| End bp | 2930156 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641617724 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_001744879 |
|---|
| Protein GI | 170681565 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.431476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATAATA TCCAACTCGC CCACGGTAGC GGCGGCCAGG CGATGCAGCA ATTAATCAAC
AGCCTGTTTA TGGAAGCCTT TGCCAACCCG TGGCTGGCAG AGCAGGAAGA TCAGGCACGT
CTTGATCTGG CGCAGCTGGT AGCGGAAGGC GACCGTCTGG CGTTCTCCAC CGACAGTTAC
GTTATTGACC CGCTGTTCTT CCCTGGCGGT AATATCGGCA AGCTGGCGAT TTGCGGCACC
GCGAATGACG TTGCGGTCAG TGGCGCTATT CCGCGCTATC TCTCCTGTGG CTTTATCCTC
GAAGAAGGAT TGCCGATGGA GACACTGAAA GCCGTAGTGA CCAGCATGGC AGAAACCGCC
CGCGCGGCAG GCATTGCCAT CGTTACTGGC GACACTAAAG TGGTGCAGCG CGGCGCGGCA
GATAAACTGT TTATCAACAC CGCTGGCATG GGCGCAATTC CGGCGAATAT TCACTGGGGC
GCACAAACGC TAACCGCAGG CGATGTTCTG CTGGTGAGTG GAACTCTCGG CGACCACGGG
GCGACTATCC TTAACCTGCG TGAGCAGCTG GGGCTGGATG GCGAACTGGT CAGCGACTGT
GCGGTACTAA CGCCGCTTAT TCAGACGCTG CGTGACATTC CCGGCGTGAA AGCGCTGCGT
GATGCCACCC GTGGTGGTGT AAACGCGGTG GTACATGAGT TCGCGGCAGC CTGCGGTTGT
GGTATTGAAC TTTCAGAAGC GGCACTGCCG GTTAAACCTG CTGTGCGTGG CGTTTGCGAG
CTGCTGGGAC TGGACGCCCT TAACTTTGCC AACGAAGGCA AACTGGTGAT CGCCGTTGAA
CGCAACGCGG CAGAGCAAGT GCTGGCAGCG TTACATTCCC ATCCACTGGG GAAAGACGCG
GCGCTGATTG GTGAAGTGGT GGAACGTAAA GGTGTTCGTC TTGCCGGTCT GTATGGCGTG
AAACGAACCC TCGATTTACC ACACGCCGAA CCGCTTCCGC GTATATGCTA A
|
|---|
| Protein sequence | MNNIQLAHGS GGQAMQQLIN SLFMEAFANP WLAEQEDQAR LDLAQLVAEG DRLAFSTDSY
VIDPLFFPGG NIGKLAICGT ANDVAVSGAI PRYLSCGFIL EEGLPMETLK AVVTSMAETA
RAAGIAIVTG DTKVVQRGAA DKLFINTAGM GAIPANIHWG AQTLTAGDVL LVSGTLGDHG
ATILNLREQL GLDGELVSDC AVLTPLIQTL RDIPGVKALR DATRGGVNAV VHEFAAACGC
GIELSEAALP VKPAVRGVCE LLGLDALNFA NEGKLVIAVE RNAAEQVLAA LHSHPLGKDA
ALIGEVVERK GVRLAGLYGV KRTLDLPHAE PLPRIC
|
|---|
| |