| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2852 |
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| Symbol | hypB |
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| ID | 6147044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2926893 |
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| End bp | 2927765 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617721 |
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| Product | hydrogenase nickel incorporation protein HypB |
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| Protein accession | YP_001744876 |
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| Protein GI | 170682287 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.484483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTACAA CATGCGGTTG CGGTGAAGGC AACCTCTATA TTGAGGGTGA TGAACATAAC
CCTCATTCCG CGTTTCGTAG CGCGCCATTT GCCCCGGCGG CACGCCCGAA GATGAAAATC
ACCGGCATTA AAGCGCCTGA ATTTACCCCC AGCCAGACTG AAGAAGGCGA CCTGCATTAC
GGTCATGGCG AAGCGGGCAC TCACGCGCCG GGCATGAGCC AGCGTCGGAT GCTGGAAGTC
GAAATTGACG TGCTGGACAA AAACAACCGT CTGGCTGAAC GCAACCGCGC GCGCTTTGCT
GCCCGCAAGC AACTGGTGCT CAACCTGGTT TCCAGCCCTG GTTCCGGTAA AACCACCCTG
CTGACGGAAA CCTTAATGCG CCTGAAAGAC AGCGTTCCGT GCGCGGTTAT TGAAGGCGAT
CAGCAAACCG TGAACGATGC CGCACGCATT CGTGCTACCG GCACACCAGC GATTCAGGTG
AATACCGGTA AAGGTTGCCA TCTTGACGCA CAGATGATCG CCGACGCCGC GCCGCGCCTG
CCACTGGACG ATAACGGTAT TCTGTTTATC GAAAACGTTG GCAACCTCGT ATGTCCGGCG
AGCTTCGATC TCGGTGAAAA ACACAAAGTG GCGGTGCTTT CCGTTACCGA AGGTGAAGAC
AAACCGCTGA AATATCCACA TATGTTTGCC GCCGCCTCAC TGATGCTGCT CAACAAAGTT
GACCTGCTGC CGTATCTCAA CTTTGACGTT GAGAAGTGCA TCGCCTGCGC CCGCGAAGTC
AATCCAGAAA TTGAAATCAT CCTTATTTCC GCCACCAGCG GCGAAGGGAT GGACCAGTGG
CTGAACTGGC TGGAGACACA GCGATGTGCA TAG
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| Protein sequence | MCTTCGCGEG NLYIEGDEHN PHSAFRSAPF APAARPKMKI TGIKAPEFTP SQTEEGDLHY
GHGEAGTHAP GMSQRRMLEV EIDVLDKNNR LAERNRARFA ARKQLVLNLV SSPGSGKTTL
LTETLMRLKD SVPCAVIEGD QQTVNDAARI RATGTPAIQV NTGKGCHLDA QMIADAAPRL
PLDDNGILFI ENVGNLVCPA SFDLGEKHKV AVLSVTEGED KPLKYPHMFA AASLMLLNKV
DLLPYLNFDV EKCIACAREV NPEIEIILIS ATSGEGMDQW LNWLETQRCA
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