| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2835 |
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| Symbol | hypF |
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| ID | 6145832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2910351 |
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| End bp | 2912639 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641617704 |
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| Product | [NiFe] hydrogenase maturation protein HypF |
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| Protein accession | YP_001744859 |
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| Protein GI | 170680945 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0257983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGGCA GGGCGGGTTA CGAAATTCAT GATGGCGGGA ATAACTCAAT GGCAAAAAAC
ATATCTTGCG GTGTCCAACT GCGTATTCGT GGCAAAGTGC AGGGCGTCGG TTTTCGTCCG
TTTGTCTGGC AACTGGCACA GCAATTAAAT CTTCACGGCG ATGTCTGTAA TGACGGCGAT
GGCGTAGAAG TCCGGCTGCT GGAAGCCCCG GAAACGTTTC TTGTTCAATT GCATCAGCAC
TGCCCGCCGC TGGCGCGTAT TGATAGCGTC GAGCGTGAGC CGTTTATCTG GTCACAACTG
CCCACTGAGT TCACTATCCG CCAGAGCACA GGCGGCACCA TGAATACGCA AATTGTCCCG
GATGCCGCCA CTTGCCCTGC TTGCCTTGCC GAAATGAATA CCCCGGGCGA GCGGCGTTAT
CGTTATCCGT TTATCAACTG TACCCACTGC GGCCCGCGTT TCACCATTAT TCGCGCGATG
CCTTACGACC GCCCGTTTAC CGTGATGGCG GCGTTTCCGC TGTGTCCGGC TTGTGACAAA
GAGTACCGCG ACCCGCTCGA TCGTCGCTTC CACGCCCAGC CGGTGGCCTG CCCGGAGTGT
GGCCCACATC TTGAATGGGT AAGTCATGGT GAACATGCAG AACAAGAGGC GGCATTACAG
GCGGCTATCG CACAGTTAAA AATGGGCAAC ATTGTCGCCA TCAAAGGGAT TGGCGGATTT
CATCTCGCCT GCGATGCGCG TAACAGTAAC GCGGTGGCGA CACTACGGGC ACGTAAACAT
CGCCCGGCGA AACCGCTGGC GGTCATGTTG CCAGTGGCTG ACGGTTTACC AGACGCTGCG
CGCCAGTTGC TTTCCACGCC CGCCGCGCCG ATTGTGCTGG TGGATAAAAA ATACATACCT
GAGCTTTGTG ATGATATCGC CCCTGGCCTT AACGAAGTTG GGGTGATGTT GCCTGCGAAC
CCGCTCCAGC ATTTGCTGTT ACAGGAACTG CAATGCCCGC TGGTGATGAC CTCCGGCAAC
CTGAGCGGTA AACCACCAGC TATCAGCAAC GAACAGGCGC TGGCGGATTT GCAGGGCATT
GCCGACGGAT TCTTGATACA TAACCGCGAC ATCGTGCAGC GGATGGATGA TTCGGTGGTG
CGCGAAAGCG GCGAAATGCT GCGCCGTTCG CGGGGGTATG TGCCGGATGC GCTGGCTTTG
CCTCCGGGCT TTAAAAATGT TCCGCCTGTG CTGTGTCTCG GCGCGGATCT GAAAAATACC
TTCTGCCTGG TGCGCGGTGA ACAAGCGGTG TTGAGTCAGC ATCTGGGCGA TTTAAGTGAC
GATGGCATCC AGATGCAGTG GCGCGAAGCG TTACGCCTGA TGCAAAACAT CTACGATTTT
ACCCCGCAAT ACGTTGTGCA TGACGCACAT CCGGGCTATG TCTCCAGCCA GTGGGCGCGC
GAAATGAATC TGCCGACGCA AACGGTGCTG CATCATCATG CCCACGCGGC GGCGTGTCTG
GCAGAACATC ACTGGCCACT GGAGGGCGGT GATGTCATTG CTTTGACGCT CGACGGTATC
GGTATGGGGG AGAACGGCGC TTTGTGGGGC GGCGAGTGTC TGCGGGTGAA CTATCGCGAA
TGCCAGCACC TGGGCGGCTT GCCAGCGGTG GCGCTTGCTG GGGGCGATTT GGCTGCAAAG
CAGCCGTGGC GTAACCTGCT GGCGCAGTGC CTGCGCTTTG TGCCGGAGTG GCAGAATTAC
CCTGAAACGG CAAGTGTGCA ACAGCAAAAC TGGAGCGTGC TGGCGCGGGC CATTGAGCGT
GGAATTAACG CGCCGCTGGC GTCATCGTGT GGGCGTTTGT TTGATGCTGT GGCGGCGGCA
CTGGGCTGTG CGCCAGCCAC GTTAAGTTAT GAAGGTGAAG CGGCTTGTGC TCTGGAGGCG
CTCGCAGCTT CATGCGACGG AGTGACGCAT CCGGTGACGA TGCCGCTGGT GGACAATCAA
CTGGATCTCG CCACTTTCTG GCAGCAGTGG CTGAACTGGC AGGCACCGGT TAATCAACGC
GCGTGGGCGT TTCATGATGC GCTGGCGCAG GGTTTTGCCG CGTTGATGCG TGAGCAGGCC
ACGATGCGCG GTATCACTAC GCTGGTATTT AGCGGTGGGG TTATTCATAA CCGATTGCTG
CGTACACGCC TGGCGCATTA TCTCGCTGAT TTCACATTAC TCTTTCCGCA GAGTTTACCG
GCGGGTGATG GCGGCTTGTC TCTGGGGCAG GGGGTTATTG CTGCGGCGCG CATCCTGCAT
GCTGCATAG
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| Protein sequence | MSGRAGYEIH DGGNNSMAKN ISCGVQLRIR GKVQGVGFRP FVWQLAQQLN LHGDVCNDGD
GVEVRLLEAP ETFLVQLHQH CPPLARIDSV EREPFIWSQL PTEFTIRQST GGTMNTQIVP
DAATCPACLA EMNTPGERRY RYPFINCTHC GPRFTIIRAM PYDRPFTVMA AFPLCPACDK
EYRDPLDRRF HAQPVACPEC GPHLEWVSHG EHAEQEAALQ AAIAQLKMGN IVAIKGIGGF
HLACDARNSN AVATLRARKH RPAKPLAVML PVADGLPDAA RQLLSTPAAP IVLVDKKYIP
ELCDDIAPGL NEVGVMLPAN PLQHLLLQEL QCPLVMTSGN LSGKPPAISN EQALADLQGI
ADGFLIHNRD IVQRMDDSVV RESGEMLRRS RGYVPDALAL PPGFKNVPPV LCLGADLKNT
FCLVRGEQAV LSQHLGDLSD DGIQMQWREA LRLMQNIYDF TPQYVVHDAH PGYVSSQWAR
EMNLPTQTVL HHHAHAAACL AEHHWPLEGG DVIALTLDGI GMGENGALWG GECLRVNYRE
CQHLGGLPAV ALAGGDLAAK QPWRNLLAQC LRFVPEWQNY PETASVQQQN WSVLARAIER
GINAPLASSC GRLFDAVAAA LGCAPATLSY EGEAACALEA LAASCDGVTH PVTMPLVDNQ
LDLATFWQQW LNWQAPVNQR AWAFHDALAQ GFAALMREQA TMRGITTLVF SGGVIHNRLL
RTRLAHYLAD FTLLFPQSLP AGDGGLSLGQ GVIAAARILH AA
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