Gene EcSMS35_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2832 
SymbolgutQ 
ID6144460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2905040 
End bp2906005 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID641617700 
ProductD-arabinose 5-phosphate isomerase 
Protein accessionYP_001744855 
Protein GI170680279 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.00103059 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGAAG CACTACTGAA CGCGGGACGT CAGACGTTAA TGCTGGAGTT ACAGGAAGCA 
AGCCGTTTAC CGGAACGTCT GGGCGATGAT TTTGTTCGCG CCGCCAATAT CATCCTGCAC
TGCGAAGGCA AAGTGGTGGT TTCGGGAATT GGCAAATCGG GCCACATTGG TAAGAAAATC
GCCGCAACGC TTGCCAGCAC CGGCACTCCT GCCTTTTTTG TCCATCCGGC AGAGGCATTG
CACGGCGACC TGGGGATGAT CGAAAGCCGC GATGTGATGC TGTTTATCTC TTACTCCGGT
GGCGCGAAGG AACTGGATCT GATTATTCCG CGTCTGGAAG ATAAATCTAT CGCGCTGCTG
GCGATGACCG GCAAACCGAC GTCACCGCTG GGCCTGGCGG CGAAAGCGGT GCTGGATATC
TCCGTAGAAC GCGAAGCCTG CCCGATGCAT CTTGCGCCGA CCTCCAGCAC CGTGAATACC
CTGATGATGG GCGACGCGTT GGCGATGGCA GTCATGCAGG CGCGTGGTTT TAATGAAGAA
GATTTTGCCC GCTCCCACCC AGCCGGGGCA CTGGGCGCTC GCTTGCTGAA TAAAGTGCAT
CATCTGATGC GCCGTGATGA CGCTATTCCG CAGGTAGCGT TAACCGCCAG CGTGATGGAT
GCGATGCTGG AACTCAGCCG CACCGGTCTG GGGCTGGTGG CGGTATGTGA CGCTCAGCAA
CAGGTACAAG GCGTCTTTAC CGACGGTGAT TTACGTCGCT GGCTGGTTGG CGGCGGCGCA
CTCACCACGC CAGTCAATGA AGCGATGACG GTCGGCGGCA CCACGTTGCA ATCGCAAAGC
CGTGCCATCG ACGCCAAAGA AATCCTGATG AAACGCAAAA TCACCGCCGC ACCGGTAGTG
GATGAAAACG GCAAACTCAC CGGCGCAATT AACCTGCAGG ATTTCTATCA GGCCGGGATT
ATTTAA
 
Protein sequence
MSEALLNAGR QTLMLELQEA SRLPERLGDD FVRAANIILH CEGKVVVSGI GKSGHIGKKI 
AATLASTGTP AFFVHPAEAL HGDLGMIESR DVMLFISYSG GAKELDLIIP RLEDKSIALL
AMTGKPTSPL GLAAKAVLDI SVEREACPMH LAPTSSTVNT LMMGDALAMA VMQARGFNEE
DFARSHPAGA LGARLLNKVH HLMRRDDAIP QVALTASVMD AMLELSRTGL GLVAVCDAQQ
QVQGVFTDGD LRRWLVGGGA LTTPVNEAMT VGGTTLQSQS RAIDAKEILM KRKITAAPVV
DENGKLTGAI NLQDFYQAGI I