| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2807 |
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| Symbol | emrA |
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| ID | 6145823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2886921 |
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| End bp | 2888093 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617676 |
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| Product | multidrug resistance protein A |
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| Protein accession | YP_001744836 |
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| Protein GI | 170682707 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000414824 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00826621 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCAA ATGCGGAGAC TCAAACCCCG CAGCAACCGG TAAAGAAGAG CGGCAAACGT
AAGCGTCTGC TCCTCCTTCT CACCTTGCTC TTTATAATTA TTGCCGTAGC GATAGGGATT
TATTGGTTTT TAGTACTGCG TCATTTCGAA GAAACCGATG ATGCATACGT GGCAGGGAAT
CAGATTCAAA TTATGTCTCA GGTGTCTGGC AGCGTGACGA AAGTCTGGGC CGATAACACC
GATTTTGTAA AAGAAGGCGA CGTGCTGGTC ACTCTCGACC CGACAGATGC TCGCCAGGCG
TTTGAAAAAG CCAAAACTGC ACTGGCTTCC AGCGTTCGCC AAACCCACCA GCTGATGATT
AACAGCAAAC AGTTGCAGGC GAATATTGAG GTGCAAAAAA TCGCACTCGC GAAAGCACAA
AGCGACTACA ACCGCCGTGT GCCGCTGGGC AATGCCAACC TGATTGGTCG CGAAGAGCTG
CAACACGCCC GCGACGCCGT TACCAGTGCC CAGGCACAAC TGGACGTCGC TATTCAACAA
TACAATGCAA ATCAGGCGAT GATTCTGGGG ACGAAACTGG AAGATCAGCC TGCCGTGCAA
CAGGCTGCCA CCGAAGTACG TAACGCCTGG CTGGCGCTGG AGCGTACTCG TATTGTCAGT
CCGATGACCG GTTATGTCTC CCGCCGCGCG GTACAGCCTG GGGCGCAAAT TAGCCCAACG
ACGCCGCTGA TGGCGGTCGT TCCAGCCACC AATATGTGGG TGGATGCCAA CTTTAAAGAG
ACGCAGATTG CCAATATGCG TATCGGTCAA CCGGTCACCA TCACCACCGA TATTTACGGC
GATGATGTGA AATACACCGG TAAAGTGGTT GGTCTGGATA TGGGCACAGG TAGCGCGTTC
TCACTGCTTC CGGCGCAAAA CGCCACCGGT AACTGGATCA AAGTCGTTCA GCGTCTGCCT
GTTCGTATTG AACTGGACCA GAAACAGCTC GAGCAATACC CGCTGCGTAT CGGTTTGTCC
ACGCTGGTGA GCGTCAATAC CACTAACCGT GACGGTCAGG TACTGGCAAA TAAAGTACGT
TCCACACCGG TAGCGGTAAG CACCGCGCGT GAAATCAGCT TGGCACCTGT CAATAAACTG
ATCGACGATA TCGTAAAAGC TAACGCTGGC TAA
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| Protein sequence | MSANAETQTP QQPVKKSGKR KRLLLLLTLL FIIIAVAIGI YWFLVLRHFE ETDDAYVAGN
QIQIMSQVSG SVTKVWADNT DFVKEGDVLV TLDPTDARQA FEKAKTALAS SVRQTHQLMI
NSKQLQANIE VQKIALAKAQ SDYNRRVPLG NANLIGREEL QHARDAVTSA QAQLDVAIQQ
YNANQAMILG TKLEDQPAVQ QAATEVRNAW LALERTRIVS PMTGYVSRRA VQPGAQISPT
TPLMAVVPAT NMWVDANFKE TQIANMRIGQ PVTITTDIYG DDVKYTGKVV GLDMGTGSAF
SLLPAQNATG NWIKVVQRLP VRIELDQKQL EQYPLRIGLS TLVSVNTTNR DGQVLANKVR
STPVAVSTAR EISLAPVNKL IDDIVKANAG
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