| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2797 |
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| Symbol | nrdE |
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| ID | 6147500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2876833 |
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| End bp | 2878977 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617666 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001744826 |
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| Protein GI | 170683654 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.708424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0256138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAACGA CAACCGCAGA ACGCCTGACG CAGGAAACGA TGGATTATCA CGCTCTGAAT
GCGATGCTTA ACCTTTACGA TAGCGCAGGT CGCATTCAGT TCGATAAAGA TCGCCAGGCA
GTAGACGCCT TTATGACAAC GCATGTGCGT CCGAACAGTG TGGCCTTCAG TAGCCAGCAG
CAGCGCCTGA ACTGGCTGGT TAACGAAGGT TACTATGATG AAAGCGTCCT TAATCGCTAC
TCTCGCGATT TTGTCATTAC GCTGTTTGCC CACGCGCACG CCAGCGGTTT TCGTTTCCAG
ACATTCCTCG GAGCATGGAA GTTTTACACC AGCTATACGT TGAAGACATT CGACGGTAAG
CGTTATCTGG AAGATTTTGC CGATCGCGTC ACGATGGTGG CGCTGACGCT GGCACAAGGC
GATGAAACAC TAGCGACGCA GCTCACTGAT GAGATGCTGT CAGGACGCTT TCAGCCAGCC
ACGCCAACAT TCCTCAACTG CGGTAAGCAG CAGCGCGGCG AACTGGTTTC CTGTTTTCTG
CTGCGTATTG AAGACAATAT GGAGTCGATT GGCCGGGCAG TAAATTCCGC ACTACAACTG
TCGAAACGCG GCGGCGGCGT AGCATTTTTG CTGTCGAATC TGCGGGAAGC GGGCGCGCCA
ATTAAACGTA TTGAAAATCA ATCTTCTGGC GTGATTCCGG TGATGAAAAT GCTGGAAGAC
GCATTTTCCT ATGCCAACCA ACTCGGCGCG CGTCAGGGGG CTGGGGCAGT CTATTTACAT
GCTCATCATC CCGATATTCT GCGTTTTCTC GATACAAAAC GGGAAAATGC CGACGAAAAA
ATCCGCATTA AAACACTGTC GCTGGGCGTG GTGATCCCGG ATATCACTTT CCATCTGGCG
AAAGAGAATG CGCAGATGGC GCTGTTTTCG CCCTATGACG TTGAGCGGGT TTATGGCAAG
CCGTTTGCCG ATGTCGCCAT CAGTGAACAC TATGACGAAC TGGTTGCCGA TGAACGCATT
CGCAAAAAAT ACCTCAACGC CCGTGATTTC TTCCAGCGAC TGGCAGAGAT CCAGTTTGAG
TCTGGCTATC CGTACATCAT GTATGAAGAC ACGGTTAACC GTGCTAACCC TATCGCCGGG
CGCATAAATA TGAGCAATCT CTGCTCAGAA ATTTTGCAGG TTAACAGCGC CTCAGATTAT
GACGAGAATC TCGACTATGC CCGTACAGGC CATGATATTT CCTGCAATTT AGGTTCGTTG
AATATTGCCC ACACCATGGA TTCCCCCGAC TTTGCCCGCA CGGTAGAGAC TGCCGTACGC
GGTTTAACGG CGGTGTCAGA TATGAGTCAT ATCCGCAGTG TGCCGTCCAT CGAAGCCGGA
AATGCCGCCT CACACGCCAT CGGTCTGGGG CAGATGAATT TACACGGTTA TCTGGCGCGA
GAAGGCATCG CTTATGGTTC GCCGGAAGCA CTGGATTTCA CCAATCTCTA TTTCTATACC
ATCACCTGGC ACGCACTGCG TACCTCGATG TTGCTGGCGC GCGAACGCGG TGAAACCTTC
GCCGGGTTCA AACAGTCACG CTATGCCAGT GGTGAATATT TCAGCCAATA TCTGCAAAGT
AACTGGCAGC CGAAAACGGC GAAAGTTGGC GAACTGTTTG CCCGTAGTGG TGTTACGTTA
CCTACCCGTG AGATGTGGGC GCAGCTGCGC GACGACGTGA TGTGCTATGG CATATACAAC
CAGAATCTCC AGGCGGTGCC CCCAACCGGT TCTATCTCTT ATATCAACCA TGCCACGTCG
AGTATTCATC CGATTGTGGC GAAAGTAGAG ATACGCAAAG AGGGCAAAAC AGGACGCGTT
TACTACCCTG CCCCGTTTAT GACTAACGAA AATCTGGCGC TGTATCAGGA CGCTTACGAA
ATCGGCGCAG AAAAGATCAT CGACACCTAC GCGGAAGCGA CTCGCCATGT CGATCAGGGG
CTGTCGCTGA CGCTGTTTTT CCCCGATACC GCCACCACTC GCGATATCAA CAAAGCGCAG
ATTTACGCCT GGCGCAAGGG TATCAAAACG CTCTATTACA TTCGCCTGCG TCAGATGGCG
CTGGAAGGCA CTGAAATTGA AGGCTGCGTC TCCTGTGCAC TTTAA
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| Protein sequence | MATTTAERLT QETMDYHALN AMLNLYDSAG RIQFDKDRQA VDAFMTTHVR PNSVAFSSQQ
QRLNWLVNEG YYDESVLNRY SRDFVITLFA HAHASGFRFQ TFLGAWKFYT SYTLKTFDGK
RYLEDFADRV TMVALTLAQG DETLATQLTD EMLSGRFQPA TPTFLNCGKQ QRGELVSCFL
LRIEDNMESI GRAVNSALQL SKRGGGVAFL LSNLREAGAP IKRIENQSSG VIPVMKMLED
AFSYANQLGA RQGAGAVYLH AHHPDILRFL DTKRENADEK IRIKTLSLGV VIPDITFHLA
KENAQMALFS PYDVERVYGK PFADVAISEH YDELVADERI RKKYLNARDF FQRLAEIQFE
SGYPYIMYED TVNRANPIAG RINMSNLCSE ILQVNSASDY DENLDYARTG HDISCNLGSL
NIAHTMDSPD FARTVETAVR GLTAVSDMSH IRSVPSIEAG NAASHAIGLG QMNLHGYLAR
EGIAYGSPEA LDFTNLYFYT ITWHALRTSM LLARERGETF AGFKQSRYAS GEYFSQYLQS
NWQPKTAKVG ELFARSGVTL PTREMWAQLR DDVMCYGIYN QNLQAVPPTG SISYINHATS
SIHPIVAKVE IRKEGKTGRV YYPAPFMTNE NLALYQDAYE IGAEKIIDTY AEATRHVDQG
LSLTLFFPDT ATTRDINKAQ IYAWRKGIKT LYYIRLRQMA LEGTEIEGCV SCAL
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