Gene EcSMS35_2796 details

Gene Information

• Locus tag: EcSMS35_2796
• Symbol: nrdI
• ID: 6146523
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010498
• Strand: +
• Start bp: 2876450
• End bp: 2876860
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641617665
• Product: ribonucleotide reductase stimulatory protein
• Protein accession: YP_001744825
• Protein GI: 170683274
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1780] Protein involved in ribonucleotide reduction
• TIGRFAM ID: [TIGR00333] ribonucleoside-diphosphate reductase 2, operon protein nrdI

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.0122492
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCCAGC TCGTCTACTT TTCCAGCAGC TCCGAAAATA CGCAGCGTTT TATCGAACGT 
TTAGGGCTGC CCGCGGTGCG CATCCCGCTC AATGAGCGGG AACGGATTCA GGTAGACGAG 
CCTTACATCC TGATCGTGCC CTCTTACGGC GGCGGCGGTA CGGCTGGCGC GGTGCCACGA 
CAGGTCATTC GCTTTTTAAA CGACGAGCAT AACCGGGCGT TGCTGCGCGG CGTTATTGCT 
TCGGGTAATC GCAACTTTGG TGAGGCATAT GGCCGCGCCG GAGATGTGAT TGCCCGGAAA 
TGCGGCGTGC CGTGGCTGTA CCGCTTTGAA CTCATGGGTA CGCAAAGCGA TATCGAAAAC 
GTTCGTAAAG GAGTAACCGA ATTTTGGCAA CGACAACCGC AGAACGCCTG A 

 

Protein sequence

MSQLVYFSSS SENTQRFIER LGLPAVRIPL NERERIQVDE PYILIVPSYG GGGTAGAVPR 
QVIRFLNDEH NRALLRGVIA SGNRNFGEAY GRAGDVIARK CGVPWLYRFE LMGTQSDIEN 
VRKGVTEFWQ RQPQNA