Gene EcSMS35_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2788 
Symbol 
ID6145329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2871135 
End bp2871659 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content46% 
IMG OID641617657 
Productputative inner membrane protein 
Protein accessionYP_001744817 
Protein GI170681672 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.34112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGA CAACCATTTC GCCGCATGAT GCACAAGAAT TAATCGCACG CGGCGCAAAG 
TTAATCGATA TTCGTGACGC TGATGAATAT CTTCGTGAAC ATATTCCTGA AGCAGATCTG
GCTCCATTAT CCGTGCTGGA ACAGTCAGGT CTTCCGGCTA AATTACGTCG CGAGCAAATT
ATATTCCACT GCCAGGCAGG TAAACGCACC AGTAATAACG CCGATAAATT AGCAGCGATT
GCCGCCCCCG CAGAAATCTT TTTACTCGAA GATGGGATTG ATGGCTGGAA AAAAGCAGGA
TTACTAGTAG CGGTAAATAA ATCTCAACCC TTGCCGTTAA TGCGCCAGGT GCAGATCGCT
GCGGGTGGTT TAATATTAAT CGGCGTTATA CTGGGTTATA CCGTAAATAG CGGTTTCTTC
TTATTAAGCG GCTTTGTTGG TGCCGGGTTA CTGTTTGCAG GAATTAGCGG TTTTTGTGGG
ATGGCAAGGT TGTTAGATAA GATGCCGTGG AACCAACGAG CTTGA
 
Protein sequence
MALTTISPHD AQELIARGAK LIDIRDADEY LREHIPEADL APLSVLEQSG LPAKLRREQI 
IFHCQAGKRT SNNADKLAAI AAPAEIFLLE DGIDGWKKAG LLVAVNKSQP LPLMRQVQIA
AGGLILIGVI LGYTVNSGFF LLSGFVGAGL LFAGISGFCG MARLLDKMPW NQRA