Gene EcSMS35_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2784 
SymbolcsiR 
ID6144834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand+ 
Start bp2869289 
End bp2869951 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID641617653 
ProductDNA-binding transcriptional regulator CsiR 
Protein accessionYP_001744813 
Protein GI170683260 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.220351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTA CGTCTCTGGA TGGCTATCGC TGGCTGAAGA ACGATATTAT TCGCGGTAAT 
TTTCAACCGG ATGAAAAATT ACGGATGAGT TTGCTGACAT CGCGTTATGC ACTTGGCGTT 
GGGCCGTTAC GGGAAGCTCT TTCGCAACTG GTGGCGGAAC GGCTGGTCAC GGTGGTGAAT 
CAAAAAGGGT ATCGGGTGGC GTCTATGTCA GAGCAGGAGC TGCTCGATAT TTTCGACGCC 
CGCGCCAATA TGGAAGCGAT GCTGGTCAGT CTGGCGATTG CCCGCGGTGG CGATGAATGG 
GAGGCAGACG TTCTCGCAAA AGCGCATCTG CTCAGTAAGC TGGAGGCCTG TGACGCCAGT 
GAGAAAATGC TTGATGAGTG GGATCTTCGT CATCAGGCGT TTCATACTGC AATTGTGGCG 
GGCTGTGGTT CTCACTATTT GCTGCAAATG CGTGAACGGT TGTTTGATCT GGCGGCGCGC 
TATCGATTTA TCTGGCTGCG GCGAACAGTG CTTTCGGTGG AGATGCTGGA GGATAAACAC 
GATCAGCACC AGACCCTGAC TGCGGCGGTA CTGGCGCGAG ATACCGCGCG CGCCAGTGAG 
TTAATGCGCC AGCATTTACT GACGCCAATT CCCATTATCC AGCAGGCGAT GGCTGGCAAT 
TAA
 
Protein sequence
MTITSLDGYR WLKNDIIRGN FQPDEKLRMS LLTSRYALGV GPLREALSQL VAERLVTVVN 
QKGYRVASMS EQELLDIFDA RANMEAMLVS LAIARGGDEW EADVLAKAHL LSKLEACDAS 
EKMLDEWDLR HQAFHTAIVA GCGSHYLLQM RERLFDLAAR YRFIWLRRTV LSVEMLEDKH 
DQHQTLTAAV LARDTARASE LMRQHLLTPI PIIQQAMAGN