| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2756 |
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| Symbol | |
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| ID | 6146815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2837355 |
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| End bp | 2838578 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641617626 |
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| Product | hypothetical protein |
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| Protein accession | YP_001744787 |
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| Protein GI | 170683267 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0689329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00382869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATAACG ATAATTCTCT TCATAAGCGC CCCACGTTTA AAAGAGCATT ACGCAACATC
AGTATGACCA GCATATTTAT CACTATGATG CTGATCTGGT TGCTGCTTTC CGTGACCTCG
GTGCTGACCC TGAAACAGTA CGCGCAAAAA AACCTGGCAC TGACAGCAGC AACAATGACT
TACAGTCTGG AAGCAGCGGT CGTTTTTGCC GATGGCCCTG CAGCAACTGA AACACTGGCA
GCGCTGGGGC AGCAAGGCCA ATTTTCAACT GCAGAAGTGC GTGATAAGCA GCAAAATATT
CTGGCATCCT GGCATTACAC CCGTAAGGAT CCAGGCGATA CTTTCAGTAA TTTCATAAGC
CACTGGCTCT TCCCTGCCCC CATCATTCAG CCGATTCGTC ACAATGGTGA AACCATTGGC
GAAGTTCGCT TAACCGCTCG CGACAGTTCA ATCAGCCATT TCATCTGGTT TTCGCTCGCT
GTCCTGACCG CCTGCATTCT GCTAGCGTCA GGCATCGCAA TTACCCTCAC CCGCCATTTG
CACAATGGTC TGGTTGAAGC GTTAAAAAAC ATCACCGATG TCGTACATGA TGTGCGTTCC
AACCGCAATT TTTCCCGACG AGTTTCGGAA GAACGTATCG CAGAGTTTCA CCGCTTCGCT
CTCGACTTCA ACAGTCTGCT GGATGAAATG GAAGAGTGGC AGCTTCGTTT ACAGGCCAAA
AATGCGCAGC TTCTACGTAC CGCACTACAT GACCCATTAA CCGGGCTGGC TAACCGCGCA
GCGTTTCGTA GCGGTATCAA CACGTTGATG AACAGTTCCG ATGCCCGAAA AACGTCGGCG
TTACTATTTC TTGATGGCGA TAATTTCAAA TATATCAATG ATACCTGGGG TCATGCGACG
GGCGATAGAG TCTTGATTGA AATAGCAAAA CGGTTAACTG AATTTGGCGG GCTGCGACAT
AAAGCATACC GCCTGGGCGG CGATGAATTC GCTATGGTGC TCTATGATGT ACAATCGGAA
TCTGAAGTGC AGCAGATATG CTCAGCACTG ACACAAATTT TTAATCTCCC GTTTGATCTT
CATAATGGCC ATCAGACTAC CATGACATTA AGCATTGGTT ACGCGATGAC CATTGAGCAC
GCCTCTGCGG AAAATTTACA AGAGCTTGCC GATCACAATA TGTATCAGGC CAAACACCAG
CGTGCCGAAA AGCTGGTGAG ATAA
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| Protein sequence | MDNDNSLHKR PTFKRALRNI SMTSIFITMM LIWLLLSVTS VLTLKQYAQK NLALTAATMT
YSLEAAVVFA DGPAATETLA ALGQQGQFST AEVRDKQQNI LASWHYTRKD PGDTFSNFIS
HWLFPAPIIQ PIRHNGETIG EVRLTARDSS ISHFIWFSLA VLTACILLAS GIAITLTRHL
HNGLVEALKN ITDVVHDVRS NRNFSRRVSE ERIAEFHRFA LDFNSLLDEM EEWQLRLQAK
NAQLLRTALH DPLTGLANRA AFRSGINTLM NSSDARKTSA LLFLDGDNFK YINDTWGHAT
GDRVLIEIAK RLTEFGGLRH KAYRLGGDEF AMVLYDVQSE SEVQQICSAL TQIFNLPFDL
HNGHQTTMTL SIGYAMTIEH ASAENLQELA DHNMYQAKHQ RAEKLVR
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