Gene EcSMS35_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2746 
SymbolclpB 
ID6143716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2826569 
End bp2829142 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content51% 
IMG OID641617616 
Productprotein disaggregation chaperone 
Protein accessionYP_001744777 
Protein GI170683980 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00462147 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.181562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGG ATCGTCTTAC TAATAAATTC CAGCTTGCTC TTGCCGATGC CCAATCACTT 
GCACTCGGGC ACGACAACCA ATTCATCGAA CCACTTCATT TAATGAGCGC CCTGCTGAAT
CAGGAAGGGG GTTCGGTTAG TCCTTTATTA ACATCCGCTG GCATAAATGC TGGCCAGTTG
CGCACAGATA TCAATCAGGC ATTAAATCGT TTACCGCAGG TTGAAGGTAC TGGTGGTGAT
GTCCAGCCAT CACAGGATCT GGTGCGCGTT CTTAATCTTT GCGACAAGCT GGCGCAAAAA
CGTGGTGATA ACTTTATCTC GTCAGAACTG TTCGTTCTGG CGGCACTTGA GTCTCGCGGC
ACGCTGGCCG ACATCCTGAA AGCAGCAGGG GCGACCACCG CCAACATTAC TCAAGCGATT
GAACAAATGC GTGGAGGTGA AAGCGTGAAC GATCAAGGTG CTGAAGACCA ACGTCAGGCT
TTGAAAAAAT ATACCATCGA CCTTACCGAA CGAGCCGAAC AGGGTAAACT CGATCCGGTG
ATTGGTCGTG ATGAAGAAAT TCGCCGTACC ATTCAGGTGC TGCAACGTCG TACTAAAAAT
AACCCGGTAC TGATTGGTGA ACCAGGCGTC GGTAAGACTG CCATCGTTGA AGGTCTGGCG
CAGCGTATTA TCAACGGCGA AGTGCCCGAA GGGTTGAAAG GCCGCCGCGT ACTGGCGCTG
GATATGGGCG CGCTGGTGGC TGGGGCGAAA TATCGCGGTG AGTTTGAAGA ACGTTTAAAA
GGCGTACTTA ACGATCTTGC CAAACAGGAA GGCAACGTCA TCCTGTTTAT CGACGAATTA
CATACCATGG TCGGCGCGGG TAAAGCCGAT GGCGCAATGG ACGCCGGAAA CATGCTGAAA
CCGGCGCTGG CGCGTGGTGA ATTGCACTGC GTAGGTGCCA CGACGCTTGA CGAATATCGC
CAGTACATCG AAAAAGATGC TGCGCTGGAA CGTCGTTTCC AGAAAGTGTT TGTTGCCGAG
CCTTCTGTTG AAGATACGAT TGCGATTCTG CGTGGCCTGA AAGAACGTTA CGAGCTGCAC
CACCATGTGC AAATTACTGA CCCGGCAATT GTTGCAGCGG CGACGTTGTC TCATCGCTAC
ATTGCTGACC GTCAGCTGCC AGATAAAGCC ATCGACCTGA TCGATGAGGC AGCATCCAGC
ATTCGTATGC AGATTGACTC AAAACCAGAA GAACTCGACC GACTCGATCG CCGTATCATC
CAGCTCAAAC TGGAACAACA GGCGTTAATG AAAGAGTCTG ATGAAGCCAG TAAAAAACGT
CTGGATATGC TCAATGAAGA ACTGAGCGAC AAAGAACGTC AGTACTCCGA GTTAGAAGAA
GAGTGGAAAG CAGAGAAAGC ATCGCTTTCT GGTACGCAGA CCATTAAAGC GGAACTGGAA
CAGGCGAAAA TCGCTATTGA ACAGGCTCGC CGTGTGGGTG ACCTGGCGCG GATGTCTGAA
CTGCAATACG GCAAAATCCC GGAACTGGAA AAGCAACTGG AAGCCGCAAC GCAGCTCGAA
GGCAAAACTA TGCGTCTGTT GCGTAATAAA GTGACCGATG CCGAAATTGC TGAAGTGCTG
GCGCGTTGGA CGGGGATTCC GGTTTCTCGC ATGATGGAAA GCGAGCGCGA AAAACTGCTG
CGTATGGAGC AAGAACTGCA CCATCGCGTT ATTGGTCAGA ACGAAGCGGT TGATGCGGTA
TCTAACGCTA TTCGTCGTAG CCGTGCGGGG CTGGCGGATC CAAATCGCCC GATTGGTTCA
TTCCTGTTCC TCGGCCCAAC GGGTGTGGGG AAAACTGAGC TTTGTAAGGC GCTGGCGAAC
TTTATGTTTG ATAGCGACGA GGCGATGGTC CGTATCGATA TGTCCGAGTT TATGGAGAAA
CACTCGGTGT CTCGTCTGGT TGGTGCGCCT CCGGGATATG TCGGTTATGA AGAAGGTGGC
TACCTGACCG AAGCGGTGCG TCGTCGTCCG TATTCCGTCA TCCTGCTGGA TGAAGTGGAA
AAAGCGCATC CGGATGTCTT CAACATTCTG TTGCAGGTAC TGGATGATGG GCGTCTGACT
GACGGGCAGG GGAGAACGGT CGACTTCCGT AATACGGTTG TCATTATGAC CTCTAACCTC
GGTTCCGATT TGATTCAGGA ACGCTTCGGT GAACTGGATT ATGCGCACAT GAAAGAGCTG
GTGCTCGGTG TGGTAAGCCA TAACTTCCGT CCGGAATTCA TTAACCGTAT CGATGAAGTG
GTGGTCTTCC ATCCGCTGGG TGAACAGCAC ATTGCGTCGA TTGCGCAGAT TCAGTTGAAA
CGTCTGTATA AACGTCTGGA AGAACGTGGT TATGAAATCC ACATTTCTGA CGAGGCGCTG
AAACTGCTGA GCGAGAACGG TTACGATCCG GTCTATGGTG CACGTCCTCT GAAACGTGCA
ATTCAGCAGC AGATCGAAAA CCCGCTGGCA CAGCAAATAC TGTCTGGTGA ATTGGTTCCG
GGTAAAGTGA TTCGCCTGGA AGTTAATGAA GACCGGATTG TCGCCGTCCA GTAA
 
Protein sequence
MRLDRLTNKF QLALADAQSL ALGHDNQFIE PLHLMSALLN QEGGSVSPLL TSAGINAGQL 
RTDINQALNR LPQVEGTGGD VQPSQDLVRV LNLCDKLAQK RGDNFISSEL FVLAALESRG
TLADILKAAG ATTANITQAI EQMRGGESVN DQGAEDQRQA LKKYTIDLTE RAEQGKLDPV
IGRDEEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIINGEVPE GLKGRRVLAL
DMGALVAGAK YRGEFEERLK GVLNDLAKQE GNVILFIDEL HTMVGAGKAD GAMDAGNMLK
PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVFVAE PSVEDTIAIL RGLKERYELH
HHVQITDPAI VAAATLSHRY IADRQLPDKA IDLIDEAASS IRMQIDSKPE ELDRLDRRII
QLKLEQQALM KESDEASKKR LDMLNEELSD KERQYSELEE EWKAEKASLS GTQTIKAELE
QAKIAIEQAR RVGDLARMSE LQYGKIPELE KQLEAATQLE GKTMRLLRNK VTDAEIAEVL
ARWTGIPVSR MMESEREKLL RMEQELHHRV IGQNEAVDAV SNAIRRSRAG LADPNRPIGS
FLFLGPTGVG KTELCKALAN FMFDSDEAMV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG
YLTEAVRRRP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSDLIQERFG ELDYAHMKEL VLGVVSHNFR PEFINRIDEV VVFHPLGEQH IASIAQIQLK
RLYKRLEERG YEIHISDEAL KLLSENGYDP VYGARPLKRA IQQQIENPLA QQILSGELVP
GKVIRLEVNE DRIVAVQ