Gene EcSMS35_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2731 
Symbol 
ID6143193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2810468 
End bp2811055 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content51% 
IMG OID641617602 
Productneutral amino-acid efflux protein 
Protein accessionYP_001744767 
Protein GI170680022 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0764776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCGA CCCTTTTAAG TGCTTTTTGG ACTTACACCC TGATTACCGC CATGACGCCA 
GGACCGAACA ATATTCTCGC CCTTAGCTCT GCTACGTCGC ATGGATTTCG TCAAAGTACT
CGCGTGCTGG CAGGGATGAG TCTGGGATTT TTGATTGTGA TGTTACTGTG TGCGGGCATT
TCATTTTCAC TGGCAGTGAT TGACCCGGCA GTGGTACACC TTTTGAGTTG GGCGGGGGCG
GCATATATTG TCTGGCTGGC GTGGAAAATC GCTACCAGTC CAACAAAGGA AGATGGGCTT
CAGACAAAAC CAATCAGTTT TTGGGCCAGC TTTGCTTTGC AGTTTGTGAA CGTCAAAATC
ATTTTGTATG GCATTACAGC ACTGTCGACA TTTGTCCTGC CACAAACGCA GGCGTTAAGC
TGGGTGATTG GCGTCAGCGT TTTGCTGGCG ATGATTGGGA CGTTTGGCAA TGTGTGCTGG
GCGCTGGCGG GGCACCTGTT TCAGCGATTG TTTCGCCAGT ATGGTCGCCA GTTAAATATC
GTGCTCGCGC TGCTGCTGGT CTATTGCGCG GTACGCATTT TCTATTAA
 
Protein sequence
MTPTLLSAFW TYTLITAMTP GPNNILALSS ATSHGFRQST RVLAGMSLGF LIVMLLCAGI 
SFSLAVIDPA VVHLLSWAGA AYIVWLAWKI ATSPTKEDGL QTKPISFWAS FALQFVNVKI
ILYGITALST FVLPQTQALS WVIGVSVLLA MIGTFGNVCW ALAGHLFQRL FRQYGRQLNI
VLALLLVYCA VRIFY