Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2717 |
Symbol | pdxJ |
ID | 6143419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2796219 |
End bp | 2796950 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641617588 |
Product | pyridoxine 5'-phosphate synthase |
Protein accession | YP_001744753 |
Protein GI | 170682415 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAT TACTGTTAGG CGTCAACATT GACCATATTG CAACGCTGCG TAACGCACGC GGTACTGCTT ACCCAGATCC GGTGCAGGCG GCGTTTATTG CTGAGCAGGC GGGAGCGGAC GGCATTACCG TGCATTTACG TGAAGATCGC CGCCACATTA CCGACCGCGA TGTGCGCATC CTGCGTCAGA CGCTGGATAC CCGCATGAAT CTGGAGATGG CGGTGACCGA AGAGATGCTG GCGATCGCCG TTGAGACGAA GCCACATTTT TGCTGTCTGG TACCGGAAAA GCGTCAGGAA GTAACAACCG AAGGCGGCCT GGACGTCGCT GGACAGCGTG AAAAAATGCG CGATGCCTGC AAACGTCTGG CGGAGGCCGG GATCCAGGTT TCTCTGTTTA TCGACGCCGA TGAAGAGCAG ATCAAAGCTG CGGCAGAGGT TGGCGCACCG TTTATCGAGA TCCACACAGG TTGCTATGCT GATGCCAAAA CTGACGCCGA ACAGGCGCAA GAGCTGGCGC GTATCGCCAA AGCCGCGACC TTTGCCGCTA GTCTCGGTCT GAAAGTTAAC GCTGGTCACG GTCTGACCTA TCACAACGTG AAAGCCATTG CCGCCATCCC TGAGATGCAT GAACTGAATA TCGGTCATGC CATTATTGGT CGTGCAGTGA TGACTGGACT GAAAGATGCG GTGGCAGAAA TGAAGCGTTT GATGCTGGAA GCGCGTGGCT AA
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Protein sequence | MAELLLGVNI DHIATLRNAR GTAYPDPVQA AFIAEQAGAD GITVHLREDR RHITDRDVRI LRQTLDTRMN LEMAVTEEML AIAVETKPHF CCLVPEKRQE VTTEGGLDVA GQREKMRDAC KRLAEAGIQV SLFIDADEEQ IKAAAEVGAP FIEIHTGCYA DAKTDAEQAQ ELARIAKAAT FAASLGLKVN AGHGLTYHNV KAIAAIPEMH ELNIGHAIIG RAVMTGLKDA VAEMKRLMLE ARG
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