Gene EcSMS35_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2717 
SymbolpdxJ 
ID6143419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2796219 
End bp2796950 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content55% 
IMG OID641617588 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_001744753 
Protein GI170682415 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT TACTGTTAGG CGTCAACATT GACCATATTG CAACGCTGCG TAACGCACGC 
GGTACTGCTT ACCCAGATCC GGTGCAGGCG GCGTTTATTG CTGAGCAGGC GGGAGCGGAC
GGCATTACCG TGCATTTACG TGAAGATCGC CGCCACATTA CCGACCGCGA TGTGCGCATC
CTGCGTCAGA CGCTGGATAC CCGCATGAAT CTGGAGATGG CGGTGACCGA AGAGATGCTG
GCGATCGCCG TTGAGACGAA GCCACATTTT TGCTGTCTGG TACCGGAAAA GCGTCAGGAA
GTAACAACCG AAGGCGGCCT GGACGTCGCT GGACAGCGTG AAAAAATGCG CGATGCCTGC
AAACGTCTGG CGGAGGCCGG GATCCAGGTT TCTCTGTTTA TCGACGCCGA TGAAGAGCAG
ATCAAAGCTG CGGCAGAGGT TGGCGCACCG TTTATCGAGA TCCACACAGG TTGCTATGCT
GATGCCAAAA CTGACGCCGA ACAGGCGCAA GAGCTGGCGC GTATCGCCAA AGCCGCGACC
TTTGCCGCTA GTCTCGGTCT GAAAGTTAAC GCTGGTCACG GTCTGACCTA TCACAACGTG
AAAGCCATTG CCGCCATCCC TGAGATGCAT GAACTGAATA TCGGTCATGC CATTATTGGT
CGTGCAGTGA TGACTGGACT GAAAGATGCG GTGGCAGAAA TGAAGCGTTT GATGCTGGAA
GCGCGTGGCT AA
 
Protein sequence
MAELLLGVNI DHIATLRNAR GTAYPDPVQA AFIAEQAGAD GITVHLREDR RHITDRDVRI 
LRQTLDTRMN LEMAVTEEML AIAVETKPHF CCLVPEKRQE VTTEGGLDVA GQREKMRDAC
KRLAEAGIQV SLFIDADEEQ IKAAAEVGAP FIEIHTGCYA DAKTDAEQAQ ELARIAKAAT
FAASLGLKVN AGHGLTYHNV KAIAAIPEMH ELNIGHAIIG RAVMTGLKDA VAEMKRLMLE
ARG