Gene EcSMS35_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2709 
Symbol 
ID6144786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2784871 
End bp2786298 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content53% 
IMG OID641617580 
Productsensor histidine kinase 
Protein accessionYP_001744745 
Protein GI170680109 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGCT GGCCCGTTTT TCCCCGCTCA TTACGACAAC TGGTAATGCT GGCATTTTTG 
CTGATTCTGC TACCCCTGTT GGTGCTGGCA TGGCAAGCCT GGCAAAGCCT GAATGCGCTT
AGCGATCAGG CGGCGCTGGT TAACCGCACT ACGCTTATTG ATGCCCGGCG CAGTGAAGCG
ATGACCAACG CGGCGCTGGA GATGGAGCGT AGCTACCGTC AGTATTGCGT GTTGGACGAC
CCAACCCTGG CGAAGGTTTA TCAAAGCCAG CGCAAGCGTT ACAGCGAAAT GCTCGATGCC
CACGCAGGCG TGCTGCCGGA CGATAAACTC TACCAGGCAT TACGTCAGGA CTTGAACAAT
CTGGCTCAAC TTCAGTGTAA CAACAGCGGT CCCGATGCCG CCGCCGCCGC GCGTCTGGAA
GCCTTTGCCA GTGCCAATAC CGAAATGGTG CAGGCCACGC GCACAGTGGT GTTCTCTCGT
GGGCAGCAAC TTCAGCGTGA AATCGCCGAA CGTGGGCAAT ATTTTGGTTG GCAATCGCTG
GTGCTATTTC TGGTGAGTCT GGTGATGGTG CTACTTTTCA CGCGGATGAT TATCGGGCCG
GTGAAAAATA TCGAGCGCAT GATCAACCGG CTGGGGGAAG GGCGTTCTCT GGGCAATAGC
GTCTCGTTCA GTGGACCGAG CGAGTTACGC TCGGTTGGGC AACGTATTCT TTGGTTAAGT
GAGCGCCTGT CATGGCTGGA ATCCCAACGC CATCAATTTT TAAGACATTT ATCTCATGAA
TTAAAAACCC CGCTGGCGAG TATGCGCGAG GGCACTGAAT TACTGGCAGA CCAGGTTGTC
GGGCCGCTTA CGCCCGAGCA AAAAGAGGTG GTGAGCATCC TTGATAGCAG CAGCCGCAAT
TTGCAAAAAC TGATCGAACA ACTGCTTGAT TACAACCGTA AACAAGCGGA CAGTGCGGTG
GAACTGGAGA ATGTTGAGTT AGCACCGCTG GTGGAGACAG TAGTTTCTGC TCATAGCCTG
CCCGCACGGG CTAAAATGAT GCATACCGAC GTTGATCTCA AAGCAACAGC TTGCCTGGCG
GAGCCAATGC TGCTGATGAG CGTACTGGAT AATCTTTACT CCAATGCGGT GCACTACGGG
GCTGAATCCG GTAACATTTG CCTTCGCAGC AGTTTACATG GTGCGCGGGT TTATATTGAT
GTCATCAATA CAGGCACGCC CATTCCGCAA GAGGAACGCG CCATGATCTT CGAACCCTTT
TTTCAGGGAA GCCACCAGCG AAAAGGGGCG GTGAAGGGCA GCGGTCTGGG ATTAAGCATT
GCCAGGGATT GTATTCGCCG TATGCAAGGG GAACTGTATC TGGTCGACGA GAGCGGGCAA
GATGTTTGTT TCCGCATTGA ATTACCGTCG TCGAAAAACA CGAAATAA
 
Protein sequence
MKRWPVFPRS LRQLVMLAFL LILLPLLVLA WQAWQSLNAL SDQAALVNRT TLIDARRSEA 
MTNAALEMER SYRQYCVLDD PTLAKVYQSQ RKRYSEMLDA HAGVLPDDKL YQALRQDLNN
LAQLQCNNSG PDAAAAARLE AFASANTEMV QATRTVVFSR GQQLQREIAE RGQYFGWQSL
VLFLVSLVMV LLFTRMIIGP VKNIERMINR LGEGRSLGNS VSFSGPSELR SVGQRILWLS
ERLSWLESQR HQFLRHLSHE LKTPLASMRE GTELLADQVV GPLTPEQKEV VSILDSSSRN
LQKLIEQLLD YNRKQADSAV ELENVELAPL VETVVSAHSL PARAKMMHTD VDLKATACLA
EPMLLMSVLD NLYSNAVHYG AESGNICLRS SLHGARVYID VINTGTPIPQ EERAMIFEPF
FQGSHQRKGA VKGSGLGLSI ARDCIRRMQG ELYLVDESGQ DVCFRIELPS SKNTK