| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2692 |
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| Symbol | hcaF |
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| ID | 6144346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2765724 |
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| End bp | 2766242 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617563 |
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| Product | 3-phenylpropionate dioxygenase subunit beta |
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| Protein accession | YP_001744728 |
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| Protein GI | 170679701 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.206867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC AAGTTTCACT GGAGTTACAT CACCGCATTA GCCAGTTTCT CTTTCACGAA
GCCAGTCTGC TGGATGACTG GAAATTTCGT GACTGGCTGG CACAGCTCGA CGAAGAAATT
CGTTACACCA TGCGCACCAC AGTTAACGCG CAAACACGCG ACCGCCGCAA AGGCGTCCAG
CCACCAACGA CCTGGATTTT TAATGACACT AAAGACCAGC TGGAGCGGCG AATCGCCCGT
CTGGAAACGG GCATGGCCTG GGCAGAAGAG CCGCCATCAC GCACTCGTCA CTTAATCAGC
AACTGCCAGG TAAGCGAAAC CGACATCCCA AACGTATTTG CTGTGCGGGT GAATTATCTA
CTTTATCGGG CACAAAAAGA GCGCGATGAA ACATTCTATG TTGGAACGCG TTTCGACAAA
GTTCGCCGTC TGGAAGATGA CAACTGGCGC TTGCTGGAAC GGGATATCGT CCTGGATCAA
GCGGTGATCA CTTCCCATAA CCTGAGTGTA CTGTTCTGA
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| Protein sequence | MSAQVSLELH HRISQFLFHE ASLLDDWKFR DWLAQLDEEI RYTMRTTVNA QTRDRRKGVQ
PPTTWIFNDT KDQLERRIAR LETGMAWAEE PPSRTRHLIS NCQVSETDIP NVFAVRVNYL
LYRAQKERDE TFYVGTRFDK VRRLEDDNWR LLERDIVLDQ AVITSHNLSV LF
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