| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2675 |
|---|
| Symbol | pepB |
|---|
| ID | 6147186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2750709 |
|---|
| End bp | 2751992 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641617546 |
|---|
| Product | aminopeptidase B |
|---|
| Protein accession | YP_001744711 |
|---|
| Protein GI | 170681265 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.334715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.941339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAG CGATGAAAAT TACCCTCTCT ACCCAACCTG CCGATGCGCG CTGGGGAGAA
AAAGCAACTT ACAGCATTAA TAATGATGGC ATTACCCTGC ACTTGAACGG AGCGGACGAT
CTGGGGCTGA TCCAGCGTGC GGCGCGCAAG ATTGACGGTC TGGGCATCAA ACATGTTCAG
CTAAGCGGTG AAGGCTGGGA TGCGGATCGT TGCTGGGCAT TCTGGCAAGG TTACAAAGCC
CCGAAAGGCA CGCGTAAAGT GGAGTGGCCG GATCTGGACG ATGTCCAGCG CCAGGAACTG
GATAACCGCC TGATGATCAT CGACTGGGTG CGTGACACCA TTAACGCACC GGCGGAAGAG
CTGGGGCCAT CGCAACTGGC ACAGCGTGCT GTTGATCTGA TCAGCAATGT CGCGGGCGAT
CGTGTGACTT ACCGGATCAC CAAAGGCGAA GATCTGCGTG ATCAAGGTTA TATGGGGCTG
CACACGGTCG GACGCGGTTC AGAACGTTCT CCGGTATTGC TGGCGCTGGA TTACAACCCG
ACTGGCGATA AAGAAGCGCC AGTGTACGCG TGCCTGGTAG GTAAAGGTAT CACTTTTGAC
TCCGGCGGCT ACAGCATCAA ACAGACCGCA TTTATGGACT CGATGAAGTC GGACATGGGC
GGCGCGGCAA CGGTTACCGG GGCGCTGGCG TTTGCCATTA CGCGCGGACT GAACAAGCGC
GTGAAGCTGT TCCTCTGCTG TGCGGATAAC CTGATCAGCG GCAACGCGTT CAAACTGGGC
GATATTATTA CCTATCGCAA CGGTAAAAAA GTTGAAGTGA TGAACACTGA TGCGGAAGGG
CGTCTGGTGC TGGCCGATGG CCTGATTGAT GCCAGTGCGC AGAAACCGGA ACTGATCATT
GATGCGGCGA CCCTCACCGG GGCGGCGAAA ACTGCGCTGG GTAATGATTA TCACGCGCTG
TTCAGTTTTG ACGATGCGCT TGCCGGTCGC TTGCTGGCGA GTGCCGCGCA GGAGAATGAA
CCGTTCTGGC GTCTGCCGCT GGCGGAGTTC CACCGCAGCC AGCTGCCGTC TAACTTTGCC
GAACTGAACA ATACCGGAAG CGCGGCGTAC CCGGCAGGCG CGAGCACGGC GGCGGGCTTC
CTGTCGCACT TTGTTGAGAA CTATCAGCAA GGCTGGCTGC ATATCGACTG CTCGGCGACT
TACCGTAAAG CGCCGGTTGA ACAGTGGTCT GCGGGTGCTA CGGGACTTGG TGTGCGCACG
ATTGCTAATC TGTTAACGGC GTAA
|
|---|
| Protein sequence | MTEAMKITLS TQPADARWGE KATYSINNDG ITLHLNGADD LGLIQRAARK IDGLGIKHVQ
LSGEGWDADR CWAFWQGYKA PKGTRKVEWP DLDDVQRQEL DNRLMIIDWV RDTINAPAEE
LGPSQLAQRA VDLISNVAGD RVTYRITKGE DLRDQGYMGL HTVGRGSERS PVLLALDYNP
TGDKEAPVYA CLVGKGITFD SGGYSIKQTA FMDSMKSDMG GAATVTGALA FAITRGLNKR
VKLFLCCADN LISGNAFKLG DIITYRNGKK VEVMNTDAEG RLVLADGLID ASAQKPELII
DAATLTGAAK TALGNDYHAL FSFDDALAGR LLASAAQENE PFWRLPLAEF HRSQLPSNFA
ELNNTGSAAY PAGASTAAGF LSHFVENYQQ GWLHIDCSAT YRKAPVEQWS AGATGLGVRT
IANLLTA
|
|---|
| |