| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2670 |
|---|
| Symbol | ndk |
|---|
| ID | 6143100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2740391 |
|---|
| End bp | 2740822 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641617541 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_001744706 |
|---|
| Protein GI | 170680359 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.20658 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTG AACGTACTTT TTCCATCATC AAACCGAACG CGGTAGCAAA AAACGTGATT
GGTAGTATCT TTGCGCGCTT TGAAGCTGCA GGGTTCAAAA TTGTCGGCAC CAAAATGCTG
CACCTGACCG TTGAACAGGC TCGTGGCTTT TATGCTGAAC ACGATGGAAA ACCGTTCTTT
GATGGTCTGG TTGAATTCAT GACTTCTGGC CCGATCGTTG TTTCCGTGCT GGAAGGTGAA
AATGCTGTTC AGCGTCACCG CGATCTGCTG GGCGCGACCA ATCCGGCAAA CGCACTGGCC
GGTACTCTGC GTGCTGATTA CGCTGACAGC CTGACCGAAA ATGGTACCCA CGGTTCTGAT
TCCGTCGAAT CTGCCGCTCG CGAAATCGCT TATTTCTTCG GCGAAGGCGA AGTGTGCCCG
CGCACCCGTT AA
|
|---|
| Protein sequence | MAIERTFSII KPNAVAKNVI GSIFARFEAA GFKIVGTKML HLTVEQARGF YAEHDGKPFF
DGLVEFMTSG PIVVSVLEGE NAVQRHRDLL GATNPANALA GTLRADYADS LTENGTHGSD
SVESAAREIA YFFGEGEVCP RTR
|
|---|
| |