Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2645 |
Symbol | upp |
ID | 6146611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2704541 |
End bp | 2705167 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617516 |
Product | uracil phosphoribosyltransferase |
Protein accession | YP_001744681 |
Protein GI | 170683104 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.325171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG TGGAAGTCAA ACACCCACTC GTCAAACACA AGCTGGGACT GATGCGTGAG CAAGATATCA GCACCAAGCG CTTTCGCGAA CTCGCTTCCG AAGTGGGTAG CCTGCTGACT TACGAAGCGA CCGCCGACCT CGAAACGGAA AAAGTCACTA TCGAAGGCTG GAACGGCCCG GTAGAAATCG ACCAGATCAA AGGTAAGAAA ATTACCGTTG TGCCAATTCT GCGTGCCGGT CTGGGGATGA TGGACGGTGT GCTGGAAAAC GTTCCGAGCG CGCGCATCAG CGTCGTCGGT ATGTACCGTA ATGAAGAAAC GCTGGAGCCG GTACCGTACT TCCAGAAACT GGTTTCTAAC ATCGATGAGC GTATGGCGCT GATCGTTGAC CCAATGCTGG CAACCGGTGG TTCCGTTATC GCGACCATCG ACCTGCTGAA AAAAGCGGGC TGCAGCAGCA TCAAAGTTCT GGTGCTGGTA GCTGCGCCAG AAGGTATCGC TGCGCTGGAA AAAGCGCACC CGGACGTCGA ACTGTATACT GCATCGATTG ACCAGGGACT GAACGAGCAC GGATACATTA TTCCGGGCCT CGGCGATGCC GGTGACAAAA TCTTTGGTAC GAAATAA
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Protein sequence | MKIVEVKHPL VKHKLGLMRE QDISTKRFRE LASEVGSLLT YEATADLETE KVTIEGWNGP VEIDQIKGKK ITVVPILRAG LGMMDGVLEN VPSARISVVG MYRNEETLEP VPYFQKLVSN IDERMALIVD PMLATGGSVI ATIDLLKKAG CSSIKVLVLV AAPEGIAALE KAHPDVELYT ASIDQGLNEH GYIIPGLGDA GDKIFGTK
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