| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2643 |
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| Symbol | hda |
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| ID | 6142724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2702370 |
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| End bp | 2703116 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641617514 |
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| Product | DNA replication initiation factor |
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| Protein accession | YP_001744679 |
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| Protein GI | 170684093 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.029874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTAAACT TCTCGCGATT TTGTGAAATC CTGGTTGAGG TATCTCTGAA CACACCGGCA
CAGCTCTCTT TGCCACTTTA TCTTCCTGAC GACGAAACCT TTGCAAGTTT CTGGCCGGGG
GATAACTCCT CTTTACTGGC CGCGCTGCAA AACGTGCTGC GTCAGGAACA TAGCGGTTAC
ATCTATCTCT GGGCACGCGA AGGCGCGGGG CGCAGCCATC TGCTGCACGC GGCTTGCGCG
GAATTGTCAC AGCGTGGCGA TGCGGTGGGT TATGTCCCGC TGGATAAACG CACCTGGTTT
GTTCCGGAAG TGCTCGACGG TATGGAGCAT TTGTCGCTGG TCTGTATCGA CAACATTGAG
TGTATTGCAG GTGATGAGTT GTGGGAGATG GCGATTTTCG ATCTCTACAA TCGAATTCTG
GAATCGGGTA AAACACGGTT GTTGATCACC GGCGATCGTC CACCGCGGCA GTTGAATCTG
GGATTACCGG ATCTCGCGTC GCGTCTCGAC TGGGGGCAGA TCTACAAATT GCAGCCACTT
TCTGATGAAG ATAAGTTGCA GGCGCTACAG TTACGCGCTC GTTTGCGTGG TTTTGAACTG
CCGGAAGATG TGGGGCGTTT CTTGCTGAAG CGGCTCGACA GAGAAATGCG CACGTTATTT
ATGACGCTGG ATCAGTTGGA TCGTGCGTCG ATTACCGCGC AACGTAAGCT GACCATTCCG
TTTGTGAAAG AAATTCTGAA GTTGTAG
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| Protein sequence | MVNFSRFCEI LVEVSLNTPA QLSLPLYLPD DETFASFWPG DNSSLLAALQ NVLRQEHSGY
IYLWAREGAG RSHLLHAACA ELSQRGDAVG YVPLDKRTWF VPEVLDGMEH LSLVCIDNIE
CIAGDELWEM AIFDLYNRIL ESGKTRLLIT GDRPPRQLNL GLPDLASRLD WGQIYKLQPL
SDEDKLQALQ LRARLRGFEL PEDVGRFLLK RLDREMRTLF MTLDQLDRAS ITAQRKLTIP
FVKEILKL
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