| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2631 |
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| Symbol | hyfD |
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| ID | 6147422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2689091 |
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| End bp | 2690530 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617502 |
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| Product | hydrogenase 4 subunit D |
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| Protein accession | YP_001744667 |
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| Protein GI | 170682661 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.960654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATC TTGCTCTGAC GACGTTATTG CTGCCTTTTA TCGGCGCACT GGTCGTTTCG
TTTTCGCCAC AACGTCGGGC CGCCGAATGG GGGATTTTGT TCGCCGCGCT GACCACGCTG
TGCATGTTGT CGCTGATCTC CGCGTTTTAT CAGGCCGATA AAGTTGCCGT CACGTTGACG
TTGGTCAACG TGGGGGATGT GGCGTTGTTT GGCCTGGTCA TTGATCGCGT GAGTACGCTG
ATTCTGTTTG TGGTGGTGTT CCTCGGTTTG CTGGTCACGA TCTACTCCAC GGGTTATCTG
ACGGATAAAA ATCGCGAACA CCCGCATAAC GGCACGAATC GTTATTACGC ATTTTTGCTG
GTGTTTATCG GCGCGATGGC GGGACTGGTA CTCTCCTCAA CGCTGCTCGG TCAGTTGTTG
TTTTTTGAAA TTACGGGCGG CTGCTCCTGG GCGTTGATCA GTTATTACCA GAGCGATAAA
GCGCAGCGTT CAGCACTAAA AGCGTTACTT ATCACTCATA TCGGTTCGCT GGGGTTGTAT
CTTGCCGCCG CCACGCTGTT TTTGCAGACC GGAACGTTTG CGCTTAGCGC GATGAGCGAG
TTACACGGCG ACGCACGTTA TCTGGTTTAT GGCGGCATTC TGTTTGCCGC GTGGGGGAAA
TCGGCCCAGC TACCGATGCA AGCGTGGCTA CCGGATGCAA TGGAAGCGCC AACACCGATC
AGCGCCTATC TCCACGCCGC ATCGATGGTG AAAGTGGGCG TTTACATTTT TGCCCGTGCC
ATTATCGACG GCGGCAATAT CCCGCATGTG ATTGGCGGCG TTGGCATGGT TATGGCACTG
GTCACCATTC TTTACGGCTT CCTGATGTAT TTGCCACAGC AGGATATGAA GCGGTTGCTG
GCCTGGTCGA CCATCACTCA ACTTGGCTGG ATGTTTTTCG GCTTGTCGCT CTCCATCTTC
GGCTCGCGGC TGTCGCTGGA GGGCAGCATC GCCTACATCG TCAACCACGC GTTCGCTAAA
AGCCTGTTTT TCCTTGTAGC AGGTGCGCTG AGTTACAGCT GCGGCACGCG CTTGTTGCCG
CGTCTGCGTG GCGTATTGCA CACCCTGCCG TTGCCAGGCG TGGGTTTCTG CGTAGCCGCG
CTGGCGATTA CTGGCGTACC GCCGTTCAAC GGCTTCTTCA GTAAATTCCC GCTGTTTGCT
GCCGGTTTTT CGTTGTCAGT GGAGTACTGG ATCCTGCTGC CCGCCATGAT TCTGCTGATG
ATTGAATCGG TCGCCAGTTT CGCCTGGTTT ATTCGCTGGT TTGGTCGCGT CGTGCCTGGC
AAACCGAGCG AGGCCGTCGC CGATGCCGCA CCGCTGCCAG GATCAATGCG CCTGGTGTTG
ATTGTACTGA TTGTGATGTC GCTGATTTCC AGCGTAATCG CCGCGACCTG GTTGCAGTAA
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| Protein sequence | MENLALTTLL LPFIGALVVS FSPQRRAAEW GILFAALTTL CMLSLISAFY QADKVAVTLT
LVNVGDVALF GLVIDRVSTL ILFVVVFLGL LVTIYSTGYL TDKNREHPHN GTNRYYAFLL
VFIGAMAGLV LSSTLLGQLL FFEITGGCSW ALISYYQSDK AQRSALKALL ITHIGSLGLY
LAAATLFLQT GTFALSAMSE LHGDARYLVY GGILFAAWGK SAQLPMQAWL PDAMEAPTPI
SAYLHAASMV KVGVYIFARA IIDGGNIPHV IGGVGMVMAL VTILYGFLMY LPQQDMKRLL
AWSTITQLGW MFFGLSLSIF GSRLSLEGSI AYIVNHAFAK SLFFLVAGAL SYSCGTRLLP
RLRGVLHTLP LPGVGFCVAA LAITGVPPFN GFFSKFPLFA AGFSLSVEYW ILLPAMILLM
IESVASFAWF IRWFGRVVPG KPSEAVADAA PLPGSMRLVL IVLIVMSLIS SVIAATWLQ
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