Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2629 |
Symbol | hyfB |
ID | 6142811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2686098 |
End bp | 2688116 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641617500 |
Product | hydrogenase 4 subunit B |
Protein accession | YP_001744665 |
Protein GI | 170680316 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCC TGCAATTATT AACCTGGTCG CTGATCCTCT ATCTGTTTGC CAGTCTGGCT TCGCTGTTTT TACTCGGTCT GGACAGACTG GCTATTAAGC TTTCCGGCAT CACATCGCTG GTGGGCGGCG TGATTGGCAT CATCAGCGGA ATTACGCAAT TACATGCAGG CGTAACTTTA GTCGCCCGTT TTGCCACGCC TTTTGACTTT GCCGATTTAA CCCTGCGAAT GGATAGCCTC TCGGCATTTA TGGTGCTGGT TATCTCCTTG CTGGTGGTGG TTTGTTCGCT CTATTCATTG ACTTATATGC GCGAATACGA GGGCAAAGGC GCGGCGGCGA TGGGCTTCTT TATGAATCTT TTCATCGCCT CGATGGTTGC CCTGCTGGTG ATGGATAACG CTTTTTGGTT CATCGTGCTG TTTGAAATGA TGTCGCTGTC TTCCTGGTTT CTGGTCATTG CCAGGCAGGA TAAAACGTCA ATCAACGCTG GCATGCTCTA CGTTTTTATC GCCCACGCCG GATCGGTGCT GATTATGATC GCCTTCTTGC TGATGGGGCG CGAAAGCGGC AGCCTCGATT TTGCCAGTTT CCGCACGCTT TCACTTTCTC CGGGGCTGGC GTCGGCGGTG TTCCTGCTGG CCTTCTTCGG TTTTGGCGCG AAAGCCGGGA TGATGCCGTT GCACAGCTGG TTGCCGCGCG CTCACCCTGC CGCACCATCG CACGCTTCGG CGTTGATGTC TGGCGTAATG GTCAAAATCG GTATTTTCGG CATCCTGAAA GTGGCGATGG ATCTGCTGGC GCAAACGGGT TTGCCGCTGT GGTGGGGCAT TCTGGTGATG GCGATCGGCG CAATCTCCGC GCTCCTGGGC GTGCTGTATG CGCTGGCGGA ACAGGATATC AAACGGCTGC TGGCCTGGAG TACCGTCGAA AACGTCGGCA TTATTTTGCT GGCGGTCGGT GTGTCCATGG TCGGTCTGTC ACTGCACGAC CCGCTGCTCA CCATGGTTGG ACTGCTCGGC GCACTGTTTC ATCTGCTCAA CCATGCGCTG TTCAAAGGGC TGCTATTTCT CGGCGCGGGT GCGATTATTT CGCGTTTGCA TACCCACGAC ATGGAAAAAA TGGGGGCACT GGCAAAACGG ATGCCGTGGA CAGCCGCAGC ATGCCTGATT GGTTGCCTCG CGATATCAGC CATTCCTCCG CTGAATGGTT TTATCAGCGA ATGGTACACC TGGCAGTCGC TGTTCTCACT AAGTCGTGTG GAAGCCGTAG CGCTACAACT TGCGGGTCCT ATTGCTATGG TGATGCTGGC AGTCACTGGT GGGCTGGCAG TAATGTGCTT CGTCAAAATG TACGGCATTA CTTTCTGTGG TGCGCCGCGC AGTACACACG CTGAAGAGGC ACAGGACGTG CCAAATACGA TGATCGTCGC CATGCTACTG CTCGCGGCAC TCTGCGTATT CATTGCGCTT AGTGCCAGTT GGCTGGCACC GAAGATAATG CACATTGCCC ATGCGTTTAC CAATACCCCT CCCGTCACTG TCGCCAGCGG AATAGCACTT GTACCCGGCA CGTTTCATAC ACGGGTCACT CCCTCATTAC TGTTGCTGTT ACTACTGGCG ATGCCTTTGC TGCCTGGCCT TTACTGGCTG TGGTGTCGTT CGCGCCGCGC AGCGTTTCGT CGCACAGGAG ATGCCTGGGC ATGCGGCTAC GGCTGGGATA ATGCGATGGC CCCGTCAGGC AATGGCGTGA TGCAGCCGCT GCGTGTGGTC TTTTGTGCGC TATTTCGTCT ACGACAACAG CTCGACCCTA CGCTGAGGCT GAACAAAGGT CTTGCGCACG TCACCGCCAG GGCTCAGAGC ACAGAACCCT TCTGGGATGA GCGGGTGATC CGCCCCATCG TGAGCGCCAC CCAACGGCTG GCCAAAGAAA TACAGCATCT GCAAAGCGGC GACTTTCGTC TCTATTGCCT GTATGTGGTC GCCGCACTGG TTGTGCTGCT AATCGCTATT GCCGTCTAA
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Protein sequence | MDALQLLTWS LILYLFASLA SLFLLGLDRL AIKLSGITSL VGGVIGIISG ITQLHAGVTL VARFATPFDF ADLTLRMDSL SAFMVLVISL LVVVCSLYSL TYMREYEGKG AAAMGFFMNL FIASMVALLV MDNAFWFIVL FEMMSLSSWF LVIARQDKTS INAGMLYVFI AHAGSVLIMI AFLLMGRESG SLDFASFRTL SLSPGLASAV FLLAFFGFGA KAGMMPLHSW LPRAHPAAPS HASALMSGVM VKIGIFGILK VAMDLLAQTG LPLWWGILVM AIGAISALLG VLYALAEQDI KRLLAWSTVE NVGIILLAVG VSMVGLSLHD PLLTMVGLLG ALFHLLNHAL FKGLLFLGAG AIISRLHTHD MEKMGALAKR MPWTAAACLI GCLAISAIPP LNGFISEWYT WQSLFSLSRV EAVALQLAGP IAMVMLAVTG GLAVMCFVKM YGITFCGAPR STHAEEAQDV PNTMIVAMLL LAALCVFIAL SASWLAPKIM HIAHAFTNTP PVTVASGIAL VPGTFHTRVT PSLLLLLLLA MPLLPGLYWL WCRSRRAAFR RTGDAWACGY GWDNAMAPSG NGVMQPLRVV FCALFRLRQQ LDPTLRLNKG LAHVTARAQS TEPFWDERVI RPIVSATQRL AKEIQHLQSG DFRLYCLYVV AALVVLLIAI AV
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