Gene EcSMS35_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2623 
SymbolpurC 
ID6143217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2681185 
End bp2681898 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content52% 
IMG OID641617494 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_001744659 
Protein GI170683399 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGC AAGCTGAGTT GTATCGTGGT AAAGCGAAAA CCGTATACAG CACGGAAAAC 
CCGGACCTGT TGGTGCTCGA ATTCCGCAAT GATACGTCAG CAGGGGATGG CGCGCGCATT
GAGCAGTTTG ATCGCAAAGG TATGGTGAAC AACAAGTTCA ACTACTTCAT TATGAGCAAA
CTGGCTGAAG CGGGTATCCC GACTCAAATG GAGCGTCTGC TCTCCGATAC CGAATGTCTG
GTGAAAAAGC TGGATATGGT GCCGGTTGAG TGTGTCGTGC GTAACCGTGC TGCTGGCTCT
CTGGTGAAAC GTCTTGGAAT CGAAGAAGGT ATTGAGCTGA ACCCGCCACT GTTCGATCTG
TTCCTGAAAA ACGACGCCAT GCACGATCCG ATGGTCAACG AATCTTACTG CGAAACCTTT
GGCTGGGTGA GCAAAGAGAA CCTGGCGCGT ATGAAAGAGC TGACCTACAA AGCGAACGAC
GTGCTGAAAA AACTGTTCGA TGATGCTGGT CTCATTCTGG TCGACTTCAA GCTGGAGTTT
GGTCTGTACA AAGGCGAAGT GGTTCTGGGC GATGAGTTCT CCCCGGACGG CAGCCGCCTG
TGGGACAAAG AAACGCTGGA GAAAATGGAC AAAGACCGTT TCCGCCAGAG CCTCGGTGGC
CTGATCGAAG CCTATGAAGC CGTTGCCCGC CGCCTGGGTG TACAGCTGGA CTGA
 
Protein sequence
MQKQAELYRG KAKTVYSTEN PDLLVLEFRN DTSAGDGARI EQFDRKGMVN NKFNYFIMSK 
LAEAGIPTQM ERLLSDTECL VKKLDMVPVE CVVRNRAAGS LVKRLGIEEG IELNPPLFDL
FLKNDAMHDP MVNESYCETF GWVSKENLAR MKELTYKAND VLKKLFDDAG LILVDFKLEF
GLYKGEVVLG DEFSPDGSRL WDKETLEKMD KDRFRQSLGG LIEAYEAVAR RLGVQLD