| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2560 |
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| Symbol | xapB |
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| ID | 6147042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2613707 |
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| End bp | 2614963 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641617431 |
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| Product | xanthosine permease XapB |
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| Protein accession | YP_001744596 |
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| Protein GI | 170682496 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00889] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000874021 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG CTTTGCGCTT AAAGGTAATG TCCTTTTTGC AATATTTTAT CTGGGGGAGC
TGGCTGGTTA CCCTCGGTTC TTACATGATT AATACCCTTC ATTTCACCGG CGCTAATGTT
GGCATGGTTT ACAGTTCCAA AGGGATCGCC GCGATTATTA TGCCTGGTAT AATGGGGATC
ATCGCAGACA AATGGCTGCG TGCAGAACGT GCATACATGC TGTGTCACCT GGTGTGTGCA
GGCGTACTTT TTTATGCGGC ATCCGTAACT GATCCGGATA TGATGTTTTG GGTGATGTTA
GTCAATGCGA TGGCGTTTAT GCCGACTATT GCGTTATCGA ACAGCGTCTC TTATTCCTGT
CTTGCCCAGG CAGGGCTTGA CCCGGTGACC GCTTTCCCGC CCATTCGCGT TTTTGGTACT
GTGGGGTTCA TTGTCGCCAT GTGGGCAGTA AGCCTGCTGC ATCTGGAATT GAGTAGTCTG
CAACTGTATA TCGCGTCCGG TGCGTCATTG CTGCTGTCGG CTTATGCGCT GACTTTGCCG
AAGATTCCGG TTGCGGAGAA AAAAGCGACT ACATCGCTTG CCAGCAAGCT GGGCCTGGAT
GCCTTCGTGC TGTTTAAAAA TCCACGCATG GCTATCTTTT TCCTCTTCGC CATGATGCTG
GGTGCGGTGC TGCAAATTAC CAACGTTTTT GGCAACCCGT TCCTGCATGA TTTCGCCCGT
AATCCTGAGT TTGCTGATAG CTTCGTGGTG AAATACCCGT CCATTTTACT GTCAGTTTCA
CAGATGGCTG AAGTCGGTTT CATTCTGACG ATACCGTTCT TTTTGAAGCG TTTCGGTATT
AAAACCGTCA TGCTGATGAG TATGGTGGCG TGGACGCTGC GCTTTGGCTT CTTTGCCTAT
GGCGACCCAT CACCAACCGG GTTTATTTTG CTGTTGCTGT CGATGATTGT TTACGGTTGT
GCATTCGATT TCTTCAATAT TTCTGGTTCG GTCTTTGTCG AACAGGAAGT TGATTCCAGC
ATTCGTGCCA GCGCCCAGGG CCTTTTTATG ACGATGGTAA ATGGCGTCGG CGCATGGGTT
GGCTCGATTC TGAGCGGTAT GGCAGTGGAT TACTTCTCGG TGGATGGCGT AAAAGATTGG
CATACCATTT GGCTGATGTT TGCAGGGTAT GCTCTTTTCC TCGCAGTGAT ATTTTTCTTT
GGGTTTAAAT ATAACCATGA CCCTGAAAAG ATAACGCATC GTTCAGTTAC ACATTAA
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| Protein sequence | MSIALRLKVM SFLQYFIWGS WLVTLGSYMI NTLHFTGANV GMVYSSKGIA AIIMPGIMGI
IADKWLRAER AYMLCHLVCA GVLFYAASVT DPDMMFWVML VNAMAFMPTI ALSNSVSYSC
LAQAGLDPVT AFPPIRVFGT VGFIVAMWAV SLLHLELSSL QLYIASGASL LLSAYALTLP
KIPVAEKKAT TSLASKLGLD AFVLFKNPRM AIFFLFAMML GAVLQITNVF GNPFLHDFAR
NPEFADSFVV KYPSILLSVS QMAEVGFILT IPFFLKRFGI KTVMLMSMVA WTLRFGFFAY
GDPSPTGFIL LLLSMIVYGC AFDFFNISGS VFVEQEVDSS IRASAQGLFM TMVNGVGAWV
GSILSGMAVD YFSVDGVKDW HTIWLMFAGY ALFLAVIFFF GFKYNHDPEK ITHRSVTH
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