Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2558 |
Symbol | xapR |
ID | 6143678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2612570 |
End bp | 2613454 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641617429 |
Product | DNA-binding transcriptional activator XapR |
Protein accession | YP_001744594 |
Protein GI | 170683306 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000632847 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCG TATATAGAAC AGATCTTAAG TTGCTCCGTT ATTTTCTTGC CGTAGCGGAA GAGTTGCATT TTGGTCGCGC AGCAGCGCGT TTAAATATGT CTCAGCCTCC GCTCAGTATT CATATTAAAG AGCTGGAAAA TCAACTCGGC ACGCAGCTTT TTATTCGCCA TTCGCGCAGC GTCGTACTGA CACACGCGGG CAAAATCTTG ATGGAAGAAT CGCGTCGATT GCTGGTGAAT GCAAATAATG TATTGGCTCG GGTTGAACAA ATAGGTCGGG GAGAAGCAGG GCGGATTGAA CTCGGGGTTG TGGGAACGGC AATGTGGGGA CGGATGCGCC CGGTTATGCG GCGATTCCTT AGAGAAAATC CTAACGTTGA AGTTCTGTTT CGCGAAAAGA TGCCCGCGAT GCAAATGGCC TTGCTGGAAC GCCGCGAACT TGATGCCGGG ATCTGGCGAA TGGCGACAGA ACCACCGACT GGTTTTACCA GCTTACGGTT GCATGAATCG GCGTTTCTGG TGGCGATGCC TGAAGAGCAT CATCTCTCAT CATTTTCCAC CGTCCCGCTG GAAGCGCTAC GTGACGAGTA TTTCGTTACA ATGCCGCCCG TGTACACTGA CTGGGATTTT TTGCAGCGAG TTTGCCAGCA GGTGGGATTT TCACCGGTTG TTATTCGCGA AGTTAATGAA CCGCAAACGG TACTCGCCAT GGTCAGTATG GGTATTGGTA TCACATTGAT AGCGGACAGC TACGCGCAGA TGAACTGGCC CGGTGTCATA TTCCGTCCGC TCAAAGAACG CATCCCGGCA GACTTATATA TTGTTTATGA AACGCAGCAG GTGACGCCCG CGCTGGTTAA ACTGCTGGCG GCGTTGGCGC AGTAG
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Protein sequence | MERVYRTDLK LLRYFLAVAE ELHFGRAAAR LNMSQPPLSI HIKELENQLG TQLFIRHSRS VVLTHAGKIL MEESRRLLVN ANNVLARVEQ IGRGEAGRIE LGVVGTAMWG RMRPVMRRFL RENPNVEVLF REKMPAMQMA LLERRELDAG IWRMATEPPT GFTSLRLHES AFLVAMPEEH HLSSFSTVPL EALRDEYFVT MPPVYTDWDF LQRVCQQVGF SPVVIREVNE PQTVLAMVSM GIGITLIADS YAQMNWPGVI FRPLKERIPA DLYIVYETQQ VTPALVKLLA ALAQ
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