Gene EcSMS35_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2541 
Symbol 
ID6146142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2600437 
End bp2601693 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content54% 
IMG OID641617413 
Producthypothetical protein 
Protein accessionYP_001744584 
Protein GI170682632 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.25776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCATC CGCGAGCCAG AACCATGTTG TTATTATCGC TCCCCGCCGT GGCAATTGGG 
ATTGCGTCCA GTCTTATTCT GATTGTGGTG ATGAAAATCG CCTCGGTATT ACAGAATTTG
CTCTGGCTAC GACTGCCGGG AACTCTGGGG ATAGCCCAGG ATTCACCTTT CTGGATCATC
GCCATATTAA CGCTAACAGG TATTGCGGTG GGGTTGGTTA TCCGTTTCAG CCAGGGGCAT
GCTGGACCAG ACCCCGCCTG TGAACCGCTG ATCGGCGCGC CGGTTCCGCC CTCTGCGCTA
CCAGGACTTA TCGTAGCATT AATTCTCGGT CTTGCTGGCG GCGTCAGCCT GGGGCCGGAA
CATCCGATCA TGACCGTCAA TATCGCCCTT GCGGTTGCGA TAGGTGCTCG TCTGTTACCG
CGCGTCAATC GGATGGAGTG GACTATTTTA GCCTCTGCCG GAACCATCGG CGCGCTGTTT
GGCACACCTG TTGCGGCGGC GTTGATATTT TCGCAAACCT TAAATGGCAG TAGTGAAGTC
CCGCTATGGG ATCGTCTCTT TGCGCCGTTA ATGGCGGCGG CGGCTGGTGC GCTAACCACC
GGATTGTTTT TCCATCCTCA TTTTTCACTG CCCATTGCGC ATTATGGGCA GATGGAGATG
ACCGATATTC TCAGCGGTGC AATTGTGGCG GCGATTGCCA TCGCAGCAGG GATGGTTGCC
GTATGGTGTC TGCCACGGTT GCACGCGATG ATGCATCAGA TTAAAAATCC GGTGCTAATG
CTGGGAGTGG GCGGATTTAT TCTCGGTATT CTGGGGGTTA TTGCTGGACC AGTTTCGCTA
TTTAAAGGGC TGGATGAGAT GCAGCAGATG GTGGCAAATC AGGCTTTCAG CACCAGCGAT
TACTTTTTGC TGGCCGTGAT TAAACTTGCC GCTCTCGTGG TTGCTGCCGC CAGCGGCTTT
CGCGGTGGGC GAATATTCCC GGCAGTGTTT GTCGGGGTGG CATTAGGGTT GATGCTGCAT
GAGCACGTTC CCGCCGTTCC AGCGGCAATA ACCGTTTCCT GCGCTATTCT CGGCATCGTG
CTGGTGGTAA CACGCGATGG CTGGTTAAGT CTTTTTATGG CGGCAGTCGT TGTACCCAAT
ACCACATTGC TACCGCTGCT CTGTATCGTC ATGCTTCCGG CATGGCTGTT ATTAGCAGGT
AAGCCGATGA TGATGGTCAA TCGTCCGAAG CAACAGCCAC CCCACGATAA CGTTTAG
 
Protein sequence
MLHPRARTML LLSLPAVAIG IASSLILIVV MKIASVLQNL LWLRLPGTLG IAQDSPFWII 
AILTLTGIAV GLVIRFSQGH AGPDPACEPL IGAPVPPSAL PGLIVALILG LAGGVSLGPE
HPIMTVNIAL AVAIGARLLP RVNRMEWTIL ASAGTIGALF GTPVAAALIF SQTLNGSSEV
PLWDRLFAPL MAAAAGALTT GLFFHPHFSL PIAHYGQMEM TDILSGAIVA AIAIAAGMVA
VWCLPRLHAM MHQIKNPVLM LGVGGFILGI LGVIAGPVSL FKGLDEMQQM VANQAFSTSD
YFLLAVIKLA ALVVAAASGF RGGRIFPAVF VGVALGLMLH EHVPAVPAAI TVSCAILGIV
LVVTRDGWLS LFMAAVVVPN TTLLPLLCIV MLPAWLLLAG KPMMMVNRPK QQPPHDNV