Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2541 |
Symbol | |
ID | 6146142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2600437 |
End bp | 2601693 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617413 |
Product | hypothetical protein |
Protein accession | YP_001744584 |
Protein GI | 170682632 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.25776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCATC CGCGAGCCAG AACCATGTTG TTATTATCGC TCCCCGCCGT GGCAATTGGG ATTGCGTCCA GTCTTATTCT GATTGTGGTG ATGAAAATCG CCTCGGTATT ACAGAATTTG CTCTGGCTAC GACTGCCGGG AACTCTGGGG ATAGCCCAGG ATTCACCTTT CTGGATCATC GCCATATTAA CGCTAACAGG TATTGCGGTG GGGTTGGTTA TCCGTTTCAG CCAGGGGCAT GCTGGACCAG ACCCCGCCTG TGAACCGCTG ATCGGCGCGC CGGTTCCGCC CTCTGCGCTA CCAGGACTTA TCGTAGCATT AATTCTCGGT CTTGCTGGCG GCGTCAGCCT GGGGCCGGAA CATCCGATCA TGACCGTCAA TATCGCCCTT GCGGTTGCGA TAGGTGCTCG TCTGTTACCG CGCGTCAATC GGATGGAGTG GACTATTTTA GCCTCTGCCG GAACCATCGG CGCGCTGTTT GGCACACCTG TTGCGGCGGC GTTGATATTT TCGCAAACCT TAAATGGCAG TAGTGAAGTC CCGCTATGGG ATCGTCTCTT TGCGCCGTTA ATGGCGGCGG CGGCTGGTGC GCTAACCACC GGATTGTTTT TCCATCCTCA TTTTTCACTG CCCATTGCGC ATTATGGGCA GATGGAGATG ACCGATATTC TCAGCGGTGC AATTGTGGCG GCGATTGCCA TCGCAGCAGG GATGGTTGCC GTATGGTGTC TGCCACGGTT GCACGCGATG ATGCATCAGA TTAAAAATCC GGTGCTAATG CTGGGAGTGG GCGGATTTAT TCTCGGTATT CTGGGGGTTA TTGCTGGACC AGTTTCGCTA TTTAAAGGGC TGGATGAGAT GCAGCAGATG GTGGCAAATC AGGCTTTCAG CACCAGCGAT TACTTTTTGC TGGCCGTGAT TAAACTTGCC GCTCTCGTGG TTGCTGCCGC CAGCGGCTTT CGCGGTGGGC GAATATTCCC GGCAGTGTTT GTCGGGGTGG CATTAGGGTT GATGCTGCAT GAGCACGTTC CCGCCGTTCC AGCGGCAATA ACCGTTTCCT GCGCTATTCT CGGCATCGTG CTGGTGGTAA CACGCGATGG CTGGTTAAGT CTTTTTATGG CGGCAGTCGT TGTACCCAAT ACCACATTGC TACCGCTGCT CTGTATCGTC ATGCTTCCGG CATGGCTGTT ATTAGCAGGT AAGCCGATGA TGATGGTCAA TCGTCCGAAG CAACAGCCAC CCCACGATAA CGTTTAG
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Protein sequence | MLHPRARTML LLSLPAVAIG IASSLILIVV MKIASVLQNL LWLRLPGTLG IAQDSPFWII AILTLTGIAV GLVIRFSQGH AGPDPACEPL IGAPVPPSAL PGLIVALILG LAGGVSLGPE HPIMTVNIAL AVAIGARLLP RVNRMEWTIL ASAGTIGALF GTPVAAALIF SQTLNGSSEV PLWDRLFAPL MAAAAGALTT GLFFHPHFSL PIAHYGQMEM TDILSGAIVA AIAIAAGMVA VWCLPRLHAM MHQIKNPVLM LGVGGFILGI LGVIAGPVSL FKGLDEMQQM VANQAFSTSD YFLLAVIKLA ALVVAAASGF RGGRIFPAVF VGVALGLMLH EHVPAVPAAI TVSCAILGIV LVVTRDGWLS LFMAAVVVPN TTLLPLLCIV MLPAWLLLAG KPMMMVNRPK QQPPHDNV
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