| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2518 |
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| Symbol | emrK |
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| ID | 6147025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2572996 |
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| End bp | 2574159 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641617390 |
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| Product | drug resistance MFS transporter, membrane fusion protein (MFP) subunit EmrK |
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| Protein accession | YP_001744561 |
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| Protein GI | 170682886 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACAGA TTAATTCAAA TAAAAAACAT TCTGACAGAA AAAAATATTT TGCTTTGTTA
GCGGTAGTTT TATTTATTGC GTTTTCAGGT GCCTATGCCT ATTGGTCAAT GGAATTAGAA
GACATGATTA GTACAGATGA CGCCTATGTC ACGGGAAATG CAGATCCAAT TTCTGCACAA
GTTTCAGGCA GCGTCACTGT CGTTAATCAT AAAGATACGA ACTACGTTCG ACAGGGTGAC
ATTTTAGTCT CACTGGATAA GACTGATGCC ACTATCGCAC TCAATAAAGC TAAAAATAAT
CTGGCCAATA TTGTTCGGCA AACGAATAAA CTGTACTTAC AGGATAAACA ATACAGTGCC
GAAGTCGCTT CAGCTCGTAT TCAGTATCAA CAATCTTTAG AAGATTATAA CCGTCGTGTA
CCTTTAGCGA AGCAGGGGGT TATTTCAAAA GAAACGCTGG AGCATACCAA AGATACGTTA
ATAAGTAGCA AAGCGGCATT GAATGCTGCT ATTCAGGCTT ATAAAGCGAA TAAAGCTTTA
GTAATGAACA CACCATTAAA CCGTCAGCCA CAAGTCGTTG AAGCGGCGGA TGCAACCAAA
GAAGCCTGGT TGGCGCTTAA ACGTACGGAT ATTAAGAGTC CGGTTACCGG CTATATTGCC
CAGCGAAGTG TTCAGGTCGG CGAAACAGTG AGTCCCGGAC AATCGTTAAT GGCTGTCGTA
CCGGCACGTC AAATGTGGGT TAATGCCAAC TTTAAAGAAA CACAACTCAC GGATGTGCGG
ATTGGTCAAT CGGTCAATAT TATTAGCGAT CTTTATGGTG AAAATGTTGT GTTTCATGGT
CGGGTGACAG GGATCAATAT GGGAACCGGC AATGCGTTCT CCTTATTACC TGCACAAAAT
GCGACAGGGA ATTGGATCAA AATCGTTCAG CGTGTACCGG TTGAGGTTTC TCTTGATCCA
AAAGAACTCA TGGAACATCC CTTGCGCATT GGTTTATCGA TGACTGCAAC TATTGATACC
AGGAACGAAG ACATTGCCGA TATGCCCGAT CTGGCTTCAA CCGTGACGTC CATGCCTGCT
TATACCAGTA AGGCTTTAAT TATCGATACC AGTCCGATAG AAAAAGAAAT TAGCAACATT
ATTTCGCATA ATGGACAACT TTAA
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| Protein sequence | MEQINSNKKH SDRKKYFALL AVVLFIAFSG AYAYWSMELE DMISTDDAYV TGNADPISAQ
VSGSVTVVNH KDTNYVRQGD ILVSLDKTDA TIALNKAKNN LANIVRQTNK LYLQDKQYSA
EVASARIQYQ QSLEDYNRRV PLAKQGVISK ETLEHTKDTL ISSKAALNAA IQAYKANKAL
VMNTPLNRQP QVVEAADATK EAWLALKRTD IKSPVTGYIA QRSVQVGETV SPGQSLMAVV
PARQMWVNAN FKETQLTDVR IGQSVNIISD LYGENVVFHG RVTGINMGTG NAFSLLPAQN
ATGNWIKIVQ RVPVEVSLDP KELMEHPLRI GLSMTATIDT RNEDIADMPD LASTVTSMPA
YTSKALIIDT SPIEKEISNI ISHNGQL
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