Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2488 |
Symbol | |
ID | 6145515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2535373 |
End bp | 2535924 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641617360 |
Product | hypothetical protein |
Protein accession | YP_001744532 |
Protein GI | 170682882 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00371874 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA AAACAACACT TAGCGAGGAG GACCAGGCGC TGTTTCGCCA GTTGATGGCG GGGACTCGCA AGATTAAGCA GGACACGATT GTCCACCGAC CGCAGCGTAA AAAAATCAGC GAAGTGCCGG TCAAGCGGTT GATTCAGGAG CAGGCCGATG CCAGCCATTA TTTCTCCGAT GAGTTTCAAC CATTATTAAA TACCGAAGGT CCGGTGAAAT ATGTTCGCCC GGATGTCAGC CATTTTGAAG CGAAGAAACT GCGGCGCGGT GATTATTCAC CGGAGCTGTT TTTGGATTTG CACGGTTTGA CGCAGCTGCA AGCCAAGCAG GAGTTAGGCG CATTGATTGC CGCCTGTCGC CGCGAACATG TGTTTTGCGC CTGTGTGATG CATGGTCATG GTAAGCATAT TTTGAAGCAG CAAACGCCAC TGTGGCTGGC GCAACATCCC CATGTAATGG CATTTCATCA GGCACCGAAA GAGTACGGTG GTGATGCGGC ATTGCTGGTG TTGATAGAAG TGGATGAGTG GCTGCCGCCG GAATTGCCCT GA
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Protein sequence | MKKKTTLSEE DQALFRQLMA GTRKIKQDTI VHRPQRKKIS EVPVKRLIQE QADASHYFSD EFQPLLNTEG PVKYVRPDVS HFEAKKLRRG DYSPELFLDL HGLTQLQAKQ ELGALIAACR REHVFCACVM HGHGKHILKQ QTPLWLAQHP HVMAFHQAPK EYGGDAALLV LIEVDEWLPP ELP
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