| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2476 |
|---|
| Symbol | pdxB |
|---|
| ID | 6143872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2523580 |
|---|
| End bp | 2524716 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641617349 |
|---|
| Product | erythronate-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_001744521 |
|---|
| Protein GI | 170681474 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATCC TTGTTGATGA AAATATGCCT TATGCCCGCG ACTTATTTAG CCGTTTGGGT
GAGGTGACCG CGGTTCCCGG GCGTCCAATT CCCGTCGCTC AACTGGCCGA CGCGGATGCG
CTGATGGTGC GTTCGGTCAC GAAAGTGAAT GAATCTTTGC TGGCAGGAAA ACCCATTAAA
TTTGTTGGCA CTGCCACAGC GGGGACCGAC CATGTCGATG AAGCGTGGTT AAAGCAGGCG
GGAATTGGTT TTTCCGCTGC ACCTGGCTGT AATGCGATTG CGGTGGTGGA ATATGTTTTC
TCCTCCCTGC TGATGCTTGC CGAACGCGAT GGATTTTCAC TGCACGAGCG TACCGTGGGG
ATCGTGGGCG TTGGTAACGT TGGTCGCCGT TTACAGGCAC GACTGGAAGC GTTAGGGATT
AAAACCTTAC TTTGCGATCC GCCTCGCGCC GACCGTGGAG ATGAGGGTGA TTTCCGCTCG
CTGGATGAAT TAGTTCAGCA TGCGGATATT CTGACTTTCC ATACGCCACT CTTTAAAGAC
GGGCCGTACA AAACGCTGCA TCTGGCGGAT GAAAAACTGA TCCGCAGCCT GAAACCAGGA
GCGATTCTGA TTAACGCCTG CCGTGGCGCA GTTGTCGATA ATACCGCCCT GCTGACCTGC
CTGAACGAAG GCCAGAAGTT AAGCGTAGTG CTGGATGTCT GGGAAGGCGA ACCGGAACTT
AACGTGGAAT TGCTGAAAAA AGTGGATATC GGCACGCCGC ATATCGCAGG CTATACCCTG
GAAGGTAAAG CACGCGGTAC TACGCAAGTG TTTGAAGCTT ATAGCAAGTT TATTGGGCAT
GAACAGCACG TTGCGCTGGA TACATTACTG CCCGCGCCAG AGTTTGGTCG CATTACGCTG
CATGGCCCGC TCGATCAGCC AACGCTGAAA AGGCTGGTGC ATTTGGTGTA TGATGTGCGC
CGCGATGACG CGCCACTGCG TAAAGTCGCC GGGATACCGG GTGAGTTCGA TAAGCTGCGC
AAAAACTATC TTGAGCGCCG TGAATGGTCA TCTCTGTATG TAATTTGTGA TGACGCCAGT
GCGGCATCAT TGCTGTGTAA ACTGGGTTTT AACGCCGTCC ATCATCCGGC ACGTTAA
|
|---|
| Protein sequence | MKILVDENMP YARDLFSRLG EVTAVPGRPI PVAQLADADA LMVRSVTKVN ESLLAGKPIK
FVGTATAGTD HVDEAWLKQA GIGFSAAPGC NAIAVVEYVF SSLLMLAERD GFSLHERTVG
IVGVGNVGRR LQARLEALGI KTLLCDPPRA DRGDEGDFRS LDELVQHADI LTFHTPLFKD
GPYKTLHLAD EKLIRSLKPG AILINACRGA VVDNTALLTC LNEGQKLSVV LDVWEGEPEL
NVELLKKVDI GTPHIAGYTL EGKARGTTQV FEAYSKFIGH EQHVALDTLL PAPEFGRITL
HGPLDQPTLK RLVHLVYDVR RDDAPLRKVA GIPGEFDKLR KNYLERREWS SLYVICDDAS
AASLLCKLGF NAVHHPAR
|
|---|
| |