Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2474 |
Symbol | truA |
ID | 6143589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2521689 |
End bp | 2522501 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641617346 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001744518 |
Protein GI | 170680088 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC AGCAACAACC GCCAGTTTAT AAAATTGCGC TGGGCATTGA GTACGACGGC AGTAAGTATT ACGGCTGGCA ACGGCAGAAC GAAGTCCGCA GTGTGCAGGA GAAGCTGGAA AAGGCGCTCT CCCAGGTGGC GAACGAACCC ATCACCGTCT TCTGCGCCGG GCGTACTGAC GCAGGTGTAC ACGGCACCGG GCAGGTTGTG CATTTCGAAA CGACCGCGCA GCGCAAAGAC GCTGCGTGGA CGTTGGGCGT AAATGCGAAT TTACCTGGTG ACATCGCCGT GCGTTGGGTT AAAGCTGTAC CTGATGATTT TCATGCCCGA TTTAGCGCCA CGGCTCGCCG TTATCGCTAC ATCATCTACA ATCATCGGCT GCGCCCGGCG GTATTGAGTA AAGGAGTAAC CCATTTTTAC GAACCGCTGG ACGCTGAACG GATGCATCGG GCTGCGCAAT GTTTGCTGGG CGAGAATGAT TTCACCTCGT TCCGTGCGGT GCAGTGTCAG TCCCGGACCC CGTGGCGCAA CGTTATGCAT ATTAATGTCA CGCGTCACGG TCCTTATGTG GTGGTAGATA TCAAAGCGAA TGCCTTTGTA CATCATATGG TCAGGAATAT TGTCGGCAGC CTGATGGAAG TCGGTGCCCA CAACCAGCCG GAGAGCTGGA TAGCAGAGTT GCTGGCGGCA AAGGACAGAA CGCTGGCGGC AGCAACGGCA AAAGCGGAAG GGCTATATCT GGTCGCGGTG GATTACCCTG ACCGATATGA TCTTCCAAAA CCGCCAATGG GCCCGCTATT TCTGGCGGAC TAA
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Protein sequence | MSDQQQPPVY KIALGIEYDG SKYYGWQRQN EVRSVQEKLE KALSQVANEP ITVFCAGRTD AGVHGTGQVV HFETTAQRKD AAWTLGVNAN LPGDIAVRWV KAVPDDFHAR FSATARRYRY IIYNHRLRPA VLSKGVTHFY EPLDAERMHR AAQCLLGEND FTSFRAVQCQ SRTPWRNVMH INVTRHGPYV VVDIKANAFV HHMVRNIVGS LMEVGAHNQP ESWIAELLAA KDRTLAAATA KAEGLYLVAV DYPDRYDLPK PPMGPLFLAD
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