| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2467 |
|---|
| Symbol | ubiX |
|---|
| ID | 6142618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2514945 |
|---|
| End bp | 2515514 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641617339 |
|---|
| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
|---|
| Protein accession | YP_001744511 |
|---|
| Protein GI | 170683430 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
|---|
| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAC TCATTGTAGG CATCAGCGGT GCCAGCGGCG CGATTTATGG CGTGCGTTTA
TTACAGGTTC TGCGCGATGT CACAGATATC GAAACGCATC TGGTAATGAG CCAGGCAGCG
CGCCAGACCT TATCCCTCGA AACGGATTTT TCCCTGCGCG AAGTGCAGGC ATTAGCCGAT
GTGACGCACG ATGCGCGCGA TATTGCTGCC AGCATTTCTT CCGGTTCTTT CCAGACGTTG
GGGATGGTGA TTTTACCCTG TTCAATCAAA ACCCTGTCCG GCATTGTCCA TAGCTATACT
GATGGCTTAC TGACCCGTGC GGCAGATGTG GTGCTGAAAG AGCGTCGCCC GTTGGTGCTC
TGCGTGCGTG AAACGCCACT GCACTTAGGC CATCTGCGTT TAATGACTCA GGCGGCAGAA
ATCGGTGCGG TGATTATGCC TCCCGTTCCG GCGTTTTATC ATCGCCCACA ATCCCTTGAT
GATGTGATAA ATCAGACGGT TAATCGTGTT CTTGACCAGT TTGCAATAAC CCTTCCTGAA
GATCTCTTTG CCCGCTGGCA GGGCGCATAA
|
|---|
| Protein sequence | MKRLIVGISG ASGAIYGVRL LQVLRDVTDI ETHLVMSQAA RQTLSLETDF SLREVQALAD
VTHDARDIAA SISSGSFQTL GMVILPCSIK TLSGIVHSYT DGLLTRAADV VLKERRPLVL
CVRETPLHLG HLRLMTQAAE IGAVIMPPVP AFYHRPQSLD DVINQTVNRV LDQFAITLPE
DLFARWQGA
|
|---|
| |