| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2460 |
|---|
| Symbol | |
|---|
| ID | 6142625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2508584 |
|---|
| End bp | 2509477 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641617332 |
|---|
| Product | NAD-binding domain-containing protein |
|---|
| Protein accession | YP_001744504 |
|---|
| Protein GI | 170683450 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
|---|
| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.040859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAG TGATCACCGG AGGGACGGGA TTAATTGGTC GCCATTTGAT TCCGCGTTTG
CTGGATCTGG GCCATCAAAT CACGGTAGTG ACGCGTAACC CGCAGAAAGC CAGTTCCGTT
CTCGGCCCTC GGGTGACACT ATGGCAAGGG CTTGCCGATC AAAGTAACCT CAACGGCTTT
GATGCGGTAA TCAACCTGGC CGGAGAGCCG ATTGCTGATA AACGCTGGAC TCACGAGCAA
AAAGAGCGTC TCTGCCAAAG CCGCTGGAAT ATCACGCAAA AACTGGTCGA TTTGATTAAT
GCCAGCGACA CGCCACCGTC GGTACTCATT TCCGGCTCGG CAACGGGCTA TTATGGCGAC
TTAGGTGAAG TGGTGGTTAC CGAAGAGGAA CCGCCGCATA ACGAATTTAC CCATAAACTC
TGCGCCCGCT GGGAAGAAAT TGCCTGTCGG GCACAAAGTG ACAAAACGCG AGTGTGCCTG
CTGCGTACCG GCGTAGTGCT GGCACCGGAT GGCGGTATTC TCGGTAAAAT GCTGCCGCCG
TTTCGTCTTG GCCTGGGCGG GCCGATTGGT TCCGGTCGGC AGTATCTGGC CTGGATTCAT
ATTGATGATA TGGTCAACGG CATTCTCTGG CTGCTGGATA ACGAGCTGCG CGGGCCATTT
AATATGGTTT CGCCCTACCC GGTACGCAAT GAACAATTTG CCCATGCGCT CGGTCATGCG
CTGCATCGCC CGGCTATTTT GCGCGTCCCC GCAACCGCCA TTCGGCTGTT AATGGGCGAA
TCTTCAGTAC TGGTATTAGG TGGACAACGC GCGCTGCCTA AACGGCTGGA AGAAGCGGGA
TTTGCGTTTC GCTGGTACGA TTTAGAAGAG GCGCTGGCGG ATGTTGTTCG CTGA
|
|---|
| Protein sequence | MKIVITGGTG LIGRHLIPRL LDLGHQITVV TRNPQKASSV LGPRVTLWQG LADQSNLNGF
DAVINLAGEP IADKRWTHEQ KERLCQSRWN ITQKLVDLIN ASDTPPSVLI SGSATGYYGD
LGEVVVTEEE PPHNEFTHKL CARWEEIACR AQSDKTRVCL LRTGVVLAPD GGILGKMLPP
FRLGLGGPIG SGRQYLAWIH IDDMVNGILW LLDNELRGPF NMVSPYPVRN EQFAHALGHA
LHRPAILRVP ATAIRLLMGE SSVLVLGGQR ALPKRLEEAG FAFRWYDLEE ALADVVR
|
|---|
| |