| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2444 |
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| Symbol | lrhA |
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| ID | 6145962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2492578 |
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| End bp | 2493516 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641617316 |
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| Product | transcriptional regulator LrhA |
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| Protein accession | YP_001744488 |
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| Protein GI | 170680027 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.531383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGTG CAAATCGTCC GATAATTAAC CTCGACCTCG ATCTGCTGAG AACATTTGTT
GCTGTTGCCG ATCTGAACAC TTTTGCTGCC GCAGCTGCCG CTGTGTGTCG TACTCAGTCC
GCCGTAAGTC AGCAAATGCA GCGTCTGGAA CAACTCGTTG GGAAAGAGCT GTTCGCTCGT
CACGGTCGCA ACAAACTGTT AACTGAACAT GGCATTCAAC TTCTTGGTTA CGCCAGAAAA
ATTCTGCGTT TTAATGATGA GGCCTGCTCA TCATTAATGT TCAGTAATCT TCAGGGCGTG
TTAACTATCG GTGCTTCAGA TGAATCTGCC GATACGATCT TACCTTTCCT GTTAAATCGC
GTGAGTTCGG TTTATCCGAA ACTAGCGCTG GATGTCCGCG TTAAACGTAA TGCCTATATG
GCAGAAATGC TGGAATCCCA GGAAGTGGAT TTGATGGTAA CCACCCATCG TCCTTCAACG
TTTAAGGCAT TGAACCTGCG TACCTCGCCA ACACACTGGT ACTGCGCAGC GGAATACGTA
TTGCAAAAAG GCGAGCCGAT CCCTCTTGTA TTGCTGGATG ATCCTAGCCC GTTTCGCGAT
ATGGTGCTGG CGACGCTTAA TAAAGCAGAT ATTCCCTGGC GACTGGCTTA TGTCGCCTCG
ACGCTTCCGG CAGTTCGTGC GGCAGTAAAA GCCGGTCTTG GCGTGACGGC AAGGCCGGTC
GAGATGATGA GTCCGGACCT GCGTGTGCTG AGTGGAGTAG ATGGCTTACC GCCGCTACCC
GATACCGAAT ATTTGCTGTG CTATGACCCG TCCAGTAATA ATGAGCTGGC CCAGGTGATC
TATCAGGCGA TGGAGAGCTA CCATAATCCG TGGCAATACA GCCCAATGTC TGCTCCGGAA
GGCGATGACT CATTGTTGAT TGAAAGGGAT ATCGAGTAA
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| Protein sequence | MISANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR
HGRNKLLTEH GIQLLGYARK ILRFNDEACS SLMFSNLQGV LTIGASDESA DTILPFLLNR
VSSVYPKLAL DVRVKRNAYM AEMLESQEVD LMVTTHRPST FKALNLRTSP THWYCAAEYV
LQKGEPIPLV LLDDPSPFRD MVLATLNKAD IPWRLAYVAS TLPAVRAAVK AGLGVTARPV
EMMSPDLRVL SGVDGLPPLP DTEYLLCYDP SSNNELAQVI YQAMESYHNP WQYSPMSAPE
GDDSLLIERD IE
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