| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2420 |
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| Symbol | menF |
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| ID | 6142620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2468727 |
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| End bp | 2470022 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617293 |
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| Product | isochorismate synthase, menaquinone-specific |
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| Protein accession | YP_001744465 |
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| Protein GI | 170680455 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.37861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAATCAC TTACTACGGC GCTGGAAAAT CTACTGCGCC ATTTGTCGCA AGAGATTCCG
GCGACACCCG GCATTCGGGT TATCGATATT CCTTTCCCTC TCAAAGACGC TTTTGATGCC
TTGAACTGGC TGGCCAGTCA GCAGGTGTAT CCGCAATTCT ACTGGCAACA ACGTAATGGT
GATGAAGAAG CTGCCGTCCT GGGTGCGATA ACCCGTTTTA CGTCGTTGGA CCAGGCACAA
CGTTTTCTTC GCCAGCACCC GGAACACGCC GACTTACGCA TCTGGGGGTT GAATGCGTTT
GACCCGTCGC AGGGCAATTT ACTTTTACCA CGCCTCGAAT GGCGACGCTG TGGCGGTAAA
GCCACGCTGC GGCTGACGCT ATTCAGCGAA AGATCCCTTC AGCATGATGC GATTAAGGCA
AAAGAATTTA TCGCCACACT GGTGAGTATT AAACCCTTGC CTGGGTTACA TTTAACCACC
ACCCGAGAAC AACACTGGCC GGACAAAACG GGCTGGACGC AATTAATCGA ACTGGCAACG
AAAACCATCG CCGAAGGCGA GCTCGACAAA GTGGTGCTTG CTCGGGCAAC TGACCTGCAT
TTCGCAAGTC CGGTCAATGC GGCGGCGATG ATGGCTGCCA GTCGTCGACT GAATCTGAAT
TGCTACCATT TTTACATGGC CTTTGATGGC GAAAATGCTT TTCTTGGCTC TTCACCGGAA
CGATTATGGT GGCGGCGTGA CAAAGCGCTG CGTACTGAAG CGCTGGCGGG AACGGTAGCA
AATCATCCTG ATGATAAGCA GGCGCAGCGG TTGGGTGAGT GGCTGATGGC GGATGATAAA
AACCAGCGCG AGAACATGTT GGTGGTGGAG GATATCTGCC AACGATTGCA GGCCGATACC
CAGACGTTGG ATGTTTTACC GCCGCAGGTA CTGCGTCTGC GTAAAGTGCA GCATCTTCGC
CGCTGTATCT GGACTGCACT CAACAAAGCG GATGATGTGA TCTGTTTACA TCAGTTGCAG
CCAACGGCAG CAGTTGCTGG CTTACCGCGC GATCTGGCGC GACAGTTTAT CGCCCGTCAC
GAACCGTTCA CCCGAGAATG GTACGCCGGT TCTGCGGGCT ATCTCTCATT ACAACAAAGC
GAATTCTGCG TTTCCCTGCG CTCAGCAAAA ATTAGCGGCA ATGTCGTGCG TCTATATGCT
GGCGCGGGCA TTGTCCGTGG TTCCGACCCC GAGCAAGAGT GGCAGGAAAT CGACAACAAA
GCGGCAGGGC TGCGTACTTT ATTACAAATG GAATAG
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| Protein sequence | MQSLTTALEN LLRHLSQEIP ATPGIRVIDI PFPLKDAFDA LNWLASQQVY PQFYWQQRNG
DEEAAVLGAI TRFTSLDQAQ RFLRQHPEHA DLRIWGLNAF DPSQGNLLLP RLEWRRCGGK
ATLRLTLFSE RSLQHDAIKA KEFIATLVSI KPLPGLHLTT TREQHWPDKT GWTQLIELAT
KTIAEGELDK VVLARATDLH FASPVNAAAM MAASRRLNLN CYHFYMAFDG ENAFLGSSPE
RLWWRRDKAL RTEALAGTVA NHPDDKQAQR LGEWLMADDK NQRENMLVVE DICQRLQADT
QTLDVLPPQV LRLRKVQHLR RCIWTALNKA DDVICLHQLQ PTAAVAGLPR DLARQFIARH
EPFTREWYAG SAGYLSLQQS EFCVSLRSAK ISGNVVRLYA GAGIVRGSDP EQEWQEIDNK
AAGLRTLLQM E
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