| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2409 |
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| Symbol | arnA |
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| ID | 6142809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2457418 |
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| End bp | 2459400 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641617282 |
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| Product | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase |
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| Protein accession | YP_001744454 |
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| Protein GI | 170682848 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase
[COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG TCGTTTTTGC CTACCACGAT ATGGGATGCC TCGGTATTGA AGCCCTGCTG
GCTGCCGGTT ACGAAATTAG CGCCATTTTT ACCCATACTG ATAATCCCGG TGAAAAAGCC
TTTTATGGTT CGGTGGCTCG TCTGGCAGCG GAAAGAGGCA TTCCGGTTTA TGCGCCGGAT
GACGTTAACC ATCCGCTGTG GGTGGAACGC ATTGCCCAAC TATCACCAGA TGTGATTTTC
TCTTTTTATT ATCGCCATCT TATTCACGAC AAGATTTTGC AGCTCGCTCC TGCAGGCGCA
TTTAATCTGC ATGGTTCACT GTTACCAAAA TATCGTGGTC GCGCGCCGCT GAACTGGGTG
CTGGTGAACG GTGAAACGGA AACTGGCGTG ACATTGCACC GAATGGTGAA ACGTGCCGAT
GCTGGGGCCA TTGTAGCCCA ACTGCGCATT GCCATTGCGC CAGACGATAT CGCCATTACG
CTGCATCATA AGTTATGCCA TGCCGCGCGA CAGCTACTGG AGCAGACATT ACCCGCCATT
AAAGACGGTA ATATTCTGGA AATCGCCCAG TGCGAAAACG AAGCCACCTG TTTTGGTCGC
AGAACGCCAG AAGACAGCTT CCTCGAGTGG CACAAATCGG CAGCAGTATT GCATAACATG
GTGCGTGCAG TCGCCGATCC GTGGCCGGGT GCCTTCAGCT ATGTTGGTAA TCAAAAATTT
ACCGTCTGGT CGTCACGCGT ACATTCTCAT GCGCCCGCAG CACAACCGGG GAGCGTGATT
TCTGTTGCGC CACTGCTGAT TGCCTGTGGC GATGGCGCGC TGGAAATCGT CACTGGACAG
GCGGGCGGCG GCATTACTAT GCAGGGCTCG CAATTAGCGC AGACGCTGGG CCTGGTGCAA
GGTTCACGCT TGAATAGCCA GCCTGCCTGT GCCGCCCGAC GCCGTACCCG GGTACTCATC
CTCGGGGTGA ATGGCTTTAT TGGCAACCAT CTGACAGAAC GCCTGCTGCG CGAAGATCAT
TATGAAGTTT ACGGTCTGGA TATTGGCAGC GATGCGATAA GCCGTTTTCT GAATCATCCG
CATTTTCACT TTGTCGAAGG CGATATCAGT ATTCATTCCG AATGGATTGA GTATCACGTC
AAAAAATGTG ATGTCGTCTT GCCTTTGGTG GCGATAGCCA CGCCGATTGA ATATACCCGC
AACCCGCTGC GCGTATTTGA ACTCGATTTC GAAGAGAATC TGCGCATTAT CCGCTACTGC
GTGAAGTACC GTAAGCGAAT CATCTTCCCG TCGACTTCAG AAGTTTATGG GATGTGTAGC
GATAAATACT TCGATGAGGA CCATTCTAAT TTAATCGTCG GCCCGGTGAA TAAACCACGC
TGGATTTATT CGGTGTCTAA ACAATTACTT GATCGAGTGA TCTGGGCCTA TGGCGAAAAA
GAAGGTTTAC AGTTCACCCT CTTCCGCCCG TTTAACTGGA TGGGGCCACG ACTGGATAAC
CTTAATGCAG CGCGAATTGG CAGCTCCCGC GCTATTACGC AACTCATTCT CAATCTGGTA
GAAGGTTCAC CGATTAAGCT GATTGATGGC GGAAAACAAA AACGCTGCTT TACTGATATT
CGGGATGGTA TCGAGGCGTT ATACCGCATT ATCGAAAATG CGGGAAATCG CTGCGATGGC
GAAATTATCA ACATTGGCAA TCCTGAGAAC GAAGCGAGCA TTGAAGAACT GGGGGAGATG
CTGCTGGCGA GCTTCGAAAA ACATCCGCTG CGCCATTACT TCCCACCGTT TGCGGGCTTT
CGTGTTGTCG AAAGTAGCAG CTACTACGGC AAAGGATATC AGGACGTAGA GCATCGTAAA
CCGAGCATCC GCAATGCCCG CCGCTGCCTG GACTGGGAAC CGAAAATTGA TATGCAGGAA
ACCATCGACG AAACGCTGGA TTTCTTCCTG CGCACCGTTG ATCTTACGGA TAAACCATCA
TGA
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| Protein sequence | MKTVVFAYHD MGCLGIEALL AAGYEISAIF THTDNPGEKA FYGSVARLAA ERGIPVYAPD
DVNHPLWVER IAQLSPDVIF SFYYRHLIHD KILQLAPAGA FNLHGSLLPK YRGRAPLNWV
LVNGETETGV TLHRMVKRAD AGAIVAQLRI AIAPDDIAIT LHHKLCHAAR QLLEQTLPAI
KDGNILEIAQ CENEATCFGR RTPEDSFLEW HKSAAVLHNM VRAVADPWPG AFSYVGNQKF
TVWSSRVHSH APAAQPGSVI SVAPLLIACG DGALEIVTGQ AGGGITMQGS QLAQTLGLVQ
GSRLNSQPAC AARRRTRVLI LGVNGFIGNH LTERLLREDH YEVYGLDIGS DAISRFLNHP
HFHFVEGDIS IHSEWIEYHV KKCDVVLPLV AIATPIEYTR NPLRVFELDF EENLRIIRYC
VKYRKRIIFP STSEVYGMCS DKYFDEDHSN LIVGPVNKPR WIYSVSKQLL DRVIWAYGEK
EGLQFTLFRP FNWMGPRLDN LNAARIGSSR AITQLILNLV EGSPIKLIDG GKQKRCFTDI
RDGIEALYRI IENAGNRCDG EIINIGNPEN EASIEELGEM LLASFEKHPL RHYFPPFAGF
RVVESSSYYG KGYQDVEHRK PSIRNARRCL DWEPKIDMQE TIDETLDFFL RTVDLTDKPS
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