Gene EcSMS35_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2408 
SymbolarnC 
ID6147504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2456450 
End bp2457418 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content51% 
IMG OID641617281 
Productundecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 
Protein accessionYP_001744453 
Protein GI170683519 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAA TCCACCCTGT TAAGAAAGTC TCGGTGGTTA TTCCCGTTTA TAACGAGCAG 
GAAAGCTTAC CGGAATTAAT CAGGCGCACC ACAAAAGCCT GTGAATCACT GGGGAAAGAG
TATGAGATCC TGCTGATTGA TGACGGCAGT AGCGATAATT CCGCGCATAT GCTGGTCGAA
GCCTCACAAG CGGAGGGCAG CCATATTGTG TCTATTTTGC TTAACCGCAA TTACGGGCAA
CATTCAGCGA TTATGGCGGG ATTCAGTCAC GTCACCGGCG ACTTAATTAT TACCCTCGAT
GCCGATCTCC AGAATCCGCC AGAGGAAATC CCCCGTCTGG TGGCAAAAGC CGATGAAGGT
TACGACGTGG TAGGGACTGT ACGCCAGAAC CGCCAGGACA GCTGGTTTCG TAAAACCGCT
TCGAAGATGA TTAACCGGCT TATTCAGCGC ACCACTGGCA AAGCGATGGG TGACTATGGT
TGTATGCTGC GCGCCTATCG CCGTCATATT GTCGATGCGA TGTTGCACTG CCATGAACGC
AGCACCTTTA TCCCGATTCT GGCGAATATC TTCGCCCGCC GTGCCATTGA AATTCCAGTG
CATCATGCCG AGCGTGAGTT TGGTGAATCC AAATACAGCT TTATGCGCCT GATTAATTTG
ATGTACGACC TGGTGACCTG CCTTACCACT ACGCCGCTAC GTATGCTGAG TCTGCTCGGC
AGCATTATTG CGATTGGCGG TTTTAGCATT GCGGTGCTGT TGGTGATTTT ACGCCTGACC
TTCGGACCCC AATGGGCGGC AGAAGGCGTC TTTATGCTAT TTGCCGTGCT GTTTACTTTT
ATTGGCGCTC AGTTTATCGG CATGGGATTG CTCGGTGAAT ATATCGGCAG GATCTACACC
GATGTCCGCG CCCGCCCCCG CTATTTTGTT CAGCAAGTTA TCCGTCCATC CAGCAAGGAA
AATGAATAA
 
Protein sequence
MFEIHPVKKV SVVIPVYNEQ ESLPELIRRT TKACESLGKE YEILLIDDGS SDNSAHMLVE 
ASQAEGSHIV SILLNRNYGQ HSAIMAGFSH VTGDLIITLD ADLQNPPEEI PRLVAKADEG
YDVVGTVRQN RQDSWFRKTA SKMINRLIQR TTGKAMGDYG CMLRAYRRHI VDAMLHCHER
STFIPILANI FARRAIEIPV HHAEREFGES KYSFMRLINL MYDLVTCLTT TPLRMLSLLG
SIIAIGGFSI AVLLVILRLT FGPQWAAEGV FMLFAVLFTF IGAQFIGMGL LGEYIGRIYT
DVRARPRYFV QQVIRPSSKE NE