Gene EcSMS35_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2401 
Symbol 
ID6146910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2449589 
End bp2450794 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content52% 
IMG OID641617274 
Productmandelate racemase/muconate lactonizing enzyme family protein 
Protein accessionYP_001744446 
Protein GI170683394 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTAC CAAAAATCAA ACAGGTTCGC GCCTGGTTTA CTGGCGGTGC GACAGCAGAA 
AAAGGCGCTG GCGGTGGTGA TTATCACGAC CAGGGGGCGA ATCACTGGAT TGACGATCAT
ATTGCCACCC CGATGAGTAA ATACCGCGAT TACGAGCAGT CACGCCAGTC ATTTGGCATT
AACGTTCTTG GCACGTTGAT TGTTGAAGTC GAAGCAGAAA ACGGCCAGAC CGGATTCGCC
GTTTCGACAG CCGGTGAAAT GGGCTGTTTT ATTGTCGAAA AACACCTTAA CCGTTTCATT
GAGGGTAAAT GTGTCAGTGA TATCAAACTG ATCCACGATC AAATGCTCAA TGCCACCCTG
TATTACTCCG GCTCTGGTGG CCTGGTGATG AATACGATTT CCTGTGTCGA TCTGGCTCTG
TGGGATCTGT TCGGCAAAGT GGTCGGGCTT CCGGTTTATA AACTTTTAGG CGGCGCAGTT
CGTGATGAGA TTCAGTTCTA CGCCACAGGT GCGCGTCCGG ATCTGGCAAA AGAGATGGGC
TTTATCGGTG GCAAAATGCC GACGCACTGG GGGCCACATG ATGGCGATGC GGGGATCCGC
AAAGATGCCG CTATGGTCGC GGATATGCGT GAAAAATGCG GTGAGGATTT CTGGTTAATG
CTCGACTGCT GGATGAGTCA GGACGTGAAC TATGCCACCA AACTGGCCCA CGCTTGCGCG
CCCTATAACC TGAAATGGAT CGAAGAGTGC CTGCCGCCAC AGCAGTATGA AGGTTATCGC
GAACTGAAAC GCAACGCACC AGCGGGGATG ATGGTCACCA GCGGTGAGCA CCACGGCACA
TTGCAATCTT TCCGTACGCT TTCAGAAACC GGTATCGACA TTATGCAGCC GGATGTTGGC
TGGTGCGGTG GCTTAACCAC GCTGGTGGAA ATTGCCGCAA TCGCCAAATC CAGGGGGCAA
CTGGTGGTGC CGCACGGTTC GTCTGTTTAC TCCCACCATG CGGTGATCAC CTTCACCAAT
ACGCCATTCA GTGAATTCCT GATGACCAGC CCGGATTGTT CAACGATGCG TCCGCAATTT
GATCCGATTC TGCTTAATGA GCCGGTTCCG GTGAATGGTC GTATTCATAA ATCAGTGCTT
GATAAACCCG GTTTCGGCGT TGAACTCAAT CGTGACTGCA ATTTGAAACG CCCCTACAGC
CACTAA
 
Protein sequence
MTLPKIKQVR AWFTGGATAE KGAGGGDYHD QGANHWIDDH IATPMSKYRD YEQSRQSFGI 
NVLGTLIVEV EAENGQTGFA VSTAGEMGCF IVEKHLNRFI EGKCVSDIKL IHDQMLNATL
YYSGSGGLVM NTISCVDLAL WDLFGKVVGL PVYKLLGGAV RDEIQFYATG ARPDLAKEMG
FIGGKMPTHW GPHDGDAGIR KDAAMVADMR EKCGEDFWLM LDCWMSQDVN YATKLAHACA
PYNLKWIEEC LPPQQYEGYR ELKRNAPAGM MVTSGEHHGT LQSFRTLSET GIDIMQPDVG
WCGGLTTLVE IAAIAKSRGQ LVVPHGSSVY SHHAVITFTN TPFSEFLMTS PDCSTMRPQF
DPILLNEPVP VNGRIHKSVL DKPGFGVELN RDCNLKRPYS H