Gene EcSMS35_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2397 
Symbol 
ID6144112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2446224 
End bp2447183 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content49% 
IMG OID641617270 
Producthypothetical protein 
Protein accessionYP_001744442 
Protein GI170680731 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CAACAACCTC CTCCCCGCAT GATGCGGTAT TTAAAACCTT TATGTTCTCG 
CCCGATACGG CGCGAGATTT TCTGGAAATA CATCTACCAG AGCCGCTGCG CAAGCTTTGC
AACCTGCAAA CCTTACGCCT GGAACCCACC AGCTTTATTG AAAAAAGTTT ACGCGCTTAC
TACTCGGATG TTTTGTGGTC TGTGGAAACC AGCGAGGGTG ACGGTTATAT CTACTGCGTG
ATTGAACATC AAAGCTCTGC AGAAAAGAAT ATGGCTTTTC GGCTAATGCG CTATGCCACT
GCCGCCATGC AGCGTCACCT GGACAAAGGC TATGACAGAG TCCCGCTGGT GGTACCATTG
CTGTTTTATC ATGGCGAAAC CTCGCCCTAC CCGTACTCAC TCAACTGGCT GGATGAGTTT
GACGATCCGC AACTTGCCCG GCAGTTGTAC ACCGAAGCTT TTCCGTTGGT GGATATCACC
ATCGTACCTG ACGATGAGAT CATGCAACAT CGGCGTATAG CTCTGCTGGA ACTGATTCAA
AAGCATATTC GCGACCGCGA TTTAATCGGT ATGGTCGACA GGATCACCAC GCTTTTGGTT
AGAGGCTTCA CTAATGACAG CCAGCTACAA ACGCTGTTTA ATTATCTGCT GCAATGCGGC
GATACCTCCC GTTTCACCCG TTTTATTGAG GAGATTGCCG AACGTTCACC ACTACAAAAG
GAGAGATTAA TGACTATTGC TGAACGGCTG CGGCAGGAAG GGCATCAAAT TGGCTGGCAG
AAGGGTAAGA TTGAAGGTTG GCAGGAGGGG AAGTTGGAGG GTTTGCAGAA AGGCAAAGTA
GAAGGTATGC ATGAACAAGC CATTAAAATT GCCTTGCGCA TGCTGGAACA GGGCTTTGAA
CGTGAGATTG TGCTGGCGAC AACCCAACTC ACTGATGCTG ATATTCCGAA CTGTTATTAA
 
Protein sequence
MTESTTSSPH DAVFKTFMFS PDTARDFLEI HLPEPLRKLC NLQTLRLEPT SFIEKSLRAY 
YSDVLWSVET SEGDGYIYCV IEHQSSAEKN MAFRLMRYAT AAMQRHLDKG YDRVPLVVPL
LFYHGETSPY PYSLNWLDEF DDPQLARQLY TEAFPLVDIT IVPDDEIMQH RRIALLELIQ
KHIRDRDLIG MVDRITTLLV RGFTNDSQLQ TLFNYLLQCG DTSRFTRFIE EIAERSPLQK
ERLMTIAERL RQEGHQIGWQ KGKIEGWQEG KLEGLQKGKV EGMHEQAIKI ALRMLEQGFE
REIVLATTQL TDADIPNCY