| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2394 |
|---|
| Symbol | glpB |
|---|
| ID | 6145888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 2443585 |
|---|
| End bp | 2444844 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641617267 |
|---|
| Product | anaerobic glycerol-3-phosphate dehydrogenase subunit B |
|---|
| Protein accession | YP_001744439 |
|---|
| Protein GI | 170681464 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3075] Anaerobic glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTTG ATACTGTCAT TATGGGCGGC GGCCTCGCCG GATTACTCTG TGGCCTGCAA
CTGCAAAAAC ACGGCCTGCG CTGTGCCATT GTCACTCGTG GTCAAAGCGC GCTGCATTTC
TCATCCGGTT CGCTGGATTT GCTGAGCCAT CTGCCGGATG GTCAACCGGT GACAGACATT
CACAGTGGAC TGGAATCTTT GCGTCAGCAG GCTCCAGCCC ATCCTTACAC TCTTCTCGGG
CCACAACGCG TACTCGATCT CGCTTGCCAG GCGCAGGCAT TAATCGCTGA AAGCGGTGCG
CAATTACAGG GCAGCGTAGA ACTGGCCCAC CAGCGTGTTA CCCCGCTCGG TACCCTGCGT
TCTACCTGGC TAAGTGCGCC AGAAGTCCCC GTCTGGCCGC TGCCCGCGAA GAAAATATGT
GTAGTAGGAA TTAGCGGTCT GATGGATTTT CAGGCGCATC TTGCGGCGGC TTCGTTGCGC
GAACTCGACC TTGCCGTTGA AACCGCAGAA ATTGAACTGC CGGAACTGGA TGTGCTGCGC
AACAACGCCA CCGAGTTTCG CGCGGTGAAT ATCGCCCGTT TCCTTGATAA CGAAGAGAAC
TGGCCGCTGT TACTTGATGC GCTTATTCCT GTCGCCAATA CCTGCGAAAT GATCCTGATG
CCCGCCTGCT TCGGCCTGGC CGATGACAAA CTGTGGCATT GGTTGAATGA AAAACTACCT
TGTTCACTGA TGCTTTTGCC AACGCTGCCG CCTTCCGTGC TGGGCATTCG TCTGCAAAAC
CAGTTACAGC GCCAGTTTGT GCGCCAGGGT GGCGTGTGGA TGCCAGGCGA TGAAGTGAAA
AAAGTGACCT GTAAAAATGG CGTAGTAAAT GAAATCTGGA CGCGCAATCA CGCCGATATC
CCGCTGCGTC CACGCTTTGC CGTGCTCGCC AGCGGCAGTT TCTTTAGCGG CGGACTGGTG
GCGGAACGTA ACGGCATTCG AGAGCCGATT CTCGGCCTTG ATGTGCTACA AACCGCCACG
CGGGGTGAAT GGTATAAGGG CGATTTTTTT GCGCCGCAAC CGTGGCAGCA GTTCGGTGTA
ACCACTGATG AGGCACTACG CCCGTCGCAG GCAGGGCAAA CCATTGAGAA CCTGTTTGCC
ATCGGTTCGG TGCTGGGCGG ATTTGATCCC ATCGCCCAGG GATGCGGCGG CGGTGTTTGT
GCCGTCAGTG CTTTACATGC CGCTCAACAG ATTGCCCAAC GCGCAGGAGG TCAACAATGA
|
|---|
| Protein sequence | MRFDTVIMGG GLAGLLCGLQ LQKHGLRCAI VTRGQSALHF SSGSLDLLSH LPDGQPVTDI
HSGLESLRQQ APAHPYTLLG PQRVLDLACQ AQALIAESGA QLQGSVELAH QRVTPLGTLR
STWLSAPEVP VWPLPAKKIC VVGISGLMDF QAHLAAASLR ELDLAVETAE IELPELDVLR
NNATEFRAVN IARFLDNEEN WPLLLDALIP VANTCEMILM PACFGLADDK LWHWLNEKLP
CSLMLLPTLP PSVLGIRLQN QLQRQFVRQG GVWMPGDEVK KVTCKNGVVN EIWTRNHADI
PLRPRFAVLA SGSFFSGGLV AERNGIREPI LGLDVLQTAT RGEWYKGDFF APQPWQQFGV
TTDEALRPSQ AGQTIENLFA IGSVLGGFDP IAQGCGGGVC AVSALHAAQQ IAQRAGGQQ
|
|---|
| |