| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2388 |
|---|
| Symbol | |
|---|
| ID | 6147132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2436264 |
|---|
| End bp | 2436914 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641617261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001744433 |
|---|
| Protein GI | 170683449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTT CAGCAAAGCA CGACGAATTT AATCACTGGT GGGCAACAGA GGGCGACTGG
GTTGAAGAGC CTAACTATCG CCGTAATGGT ATGAGCGGGG TGCAATGCGT CGAGCGCAAC
GGCAAAAAGC TATATGTAAA GCGCATGACG CATCATCTGT TTCATTCCGT ACGTTATCCG
TTCGGTCGAC CAACGATTGT CCGTGAGGTT GCGGTAATTA AAGAACTGGA ACGGGCTGGT
GTCATCGTGC CGAAGATCGT TTTTGGTGAA GCGGTGAAAA TTGAGGGGGA ATGGCGCGCG
TTGCTGGTGA CTGAAGATAT GGCGGGGTTC ATCAGCATTG CTGACTGGTA TGCCCGGCAT
GCAGTATCGC CTTATTCTGA CGAAGTACGG CAAGCCATGT TGAAAGCAGT GGCGCTGGCG
TTTAAGAAAA TGCATAGCGT TAATCGTCAG CATGGCTGTT GTTATGTTCG CCATATCTAT
GTGAAAACAG AAGGTAAGGC AGAAGCTGGA TTTCTTGACC TGGAGAAAAG TCGTCGCCGC
TTGCGTCGTG ATAAAGCGAT TAATCATGAC TTCCGCCAGC TGGAAAAATA TCTGGAGCCG
ATCCCTAAAG CGGACTGGGA GCAGGTGAAA GCGTATTACT ACGCCATGTA A
|
|---|
| Protein sequence | MAVSAKHDEF NHWWATEGDW VEEPNYRRNG MSGVQCVERN GKKLYVKRMT HHLFHSVRYP
FGRPTIVREV AVIKELERAG VIVPKIVFGE AVKIEGEWRA LLVTEDMAGF ISIADWYARH
AVSPYSDEVR QAMLKAVALA FKKMHSVNRQ HGCCYVRHIY VKTEGKAEAG FLDLEKSRRR
LRRDKAINHD FRQLEKYLEP IPKADWEQVK AYYYAM
|
|---|
| |