Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2374 |
Symbol | |
ID | 6142649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2410964 |
End bp | 2411740 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641617247 |
Product | hypothetical protein |
Protein accession | YP_001744419 |
Protein GI | 170684048 |
COG category | [S] Function unknown |
COG ID | [COG4676] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAAAGA TTTTTCTTCC GTTGTTACTG GTGGCGCTTT CGCCTGTCGC TCACAGTGAA GGTGTGCAGG AAGTCGAGAT TGATGCACCG CTCTCTGGCT GGCATCCGGC AGAGGGCGAA GATGCCAGTT TTTCACAATC GATCAATTAC CCGGCGTCGT CCGTCAACAT GGCAGATGAT CAAAATATCT CAGCGCAGAT CCGCGGCAAA ATAAAGAATT ATGCTGCGGC GGGTAAAGTT CAGCAGGGCC GGCTGGTGGT CAACGGTGCC AGTATGCCGC AGAGAATTGA ATCCGATGGT TCATTTGCAC GCCCTTATAT TTTCACGGAA GGCAGCAACA GCGTGCAGGT CATCAGCCCG GATGGGCAAA GCCGGCAAAA AATGCAGTTT TACTCAACGC CGGGTGCTGG AGTGATCCGC GCGCGTTTAC GACTGGTTCT CTCGTGGGAT ACGGACGATA CCGACCTCGA CCTTCACGTT GTTACGCCCG ATGGCGAACA CGCCTGGTAC GGTAACACCG TGCTGAACAA CAGTGGTGCA CTGGATATGG ATGTCACGAC GGGGTACGGC CCCGAGATTT TCGCCATGCC AGCGCCAGTT CACGGGCGCT ATCAGGTGTA TATCAACTAC TATGGCGGAC GCAGCGAAAC GGAATTAACC ACCGCCCAAC TGACGCTGAT CACCGATGAA GGATCGGTCA ATGAGAAACA GGAAACATTT ATTGTACCGA TGCGTAATGC TGGCGAGCTG ACGCTGGTGA AAAGTTTTGA CTGGTGA
|
Protein sequence | MRKIFLPLLL VALSPVAHSE GVQEVEIDAP LSGWHPAEGE DASFSQSINY PASSVNMADD QNISAQIRGK IKNYAAAGKV QQGRLVVNGA SMPQRIESDG SFARPYIFTE GSNSVQVISP DGQSRQKMQF YSTPGAGVIR ARLRLVLSWD TDDTDLDLHV VTPDGEHAWY GNTVLNNSGA LDMDVTTGYG PEIFAMPAPV HGRYQVYINY YGGRSETELT TAQLTLITDE GSVNEKQETF IVPMRNAGEL TLVKSFDW
|
| |