| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2368 |
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| Symbol | atoS |
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| ID | 6144061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2403640 |
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| End bp | 2405466 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641617241 |
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| Product | sensory histidine kinase AtoS |
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| Protein accession | YP_001744413 |
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| Protein GI | 170680522 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0221711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTATA TGAAGTGGAT TTATCCACGC CGCTTACGCA ATCAAATGAT CCTGATGGCA
ATCCTGATGG TCATTGTCCC AACGCTTACT ATTGGTTATA TCGTAGAAAC GGAAGGACGT
TCAGCAGTCT TATCTGAAAA AGAGAAAAAA CTTTCTGCCG TGGTCAACCT GCTTAATCAG
GCACTAGGCG ATCGCTATGA TCTCTACATC GACTTACCAC GTGAGGAGCG TATCCGCGCA
TTAAATGCAG AACTTGCCCC CATTACCGAA AATATCACTC ACGCCTTCCC TGGCATCGGC
GCTGGTTATT ACAACAAAAC GCTGGATGCG ATAATCACCT ACGCGCCTTC AGCGCTATAT
CAGAATAATG TCGGCGTTAC CATTGCCGCA GATCACCCTG GTCGCGAAGT CATGCGTACA
AATACCCCTT TGGTTTATTC AGGCAGGCAG GTGCGCGGCG ATATTTTGAA TTCAATGATT
CCCATTGAGC GTAATGGTGA AATCCTCGGC TATATCTGGG CCAATGAATT AACCGAAGAT
ATTCGCCGCC AGGCCTGGAA AATGGATGTG AGGATTATCA TTGTGCTCAC CGCCGGTTTG
CTGATAAGCC TGCTGTTGAT TGTCCTTTTC TCCCGTCGCC TGAGCGCCAA TATAGATATC
ATCACCGATG GCCTCTCGAC TCTGGCACAA AATATTCCCA CTCGATTACC ACAATTGCCC
GGTGAAATGG GGCAAATCAG TCAGAGTGTT AACAACCTCG CCCAGGCACT GCGTGAAACG
CGGACACTTA ACGATCTGAT TATTGAAAAC GCTGCCGATG GCGTCATTGC CATTGACCGC
CAGGGTGATG TAACCACCAT GAACCCGGCA GCAGAAGTCA TCACTGGCTA TCAACGTCAT
GAACTGGTAG GGCAGCCTTA CTCCATGTTG TTCGACAATA CTCAGTTCTA CAGTCCAGTA
CTGGATACGC TGGAACATGG CACCGAACAT GTGGCGCTGG AGATCAGTTT TCCAGGCCGT
GACCGCACCA TTGAACTCAG TGTCACGACC AGTCGTATTC ATAACACGCA CGGTGAAATG
ATAGGTGCTT TGGTGATTTT CTCTGATTTA ACTGCCCGCA AAGAAACCCA GCGCCGCATG
GCGCAAGCAG AACGCCTCGC CACACTGGGT GAGCTGATGG CTGGCGTGGC GCATGAAGTA
CGTAATCCGC TAACGGCTAT TCGTGGTTAT GTACAGATCT TGCGCCAACA AACCAGCGAC
CTAATACATC AGGAATATCT GTCCGTAGTA CTCAAAGAAA TTGATTCAAT TAACAAAGTT
ATTCAGCAAT TGCTCGAATT TTCACGTCCA CGCCACAGTC AATGGCAACA AGTCAGCCTC
AATGCATTGG TTGAAGAAAC TCTGGTACTG GTACAAACCG CCGGCGTACA AGCGCGGGTC
GACTTCATAA GCGAACTGGA TAATGAATTA AGCCCGATTA ACGCCGATCG TGAACTGCTC
AAACAGGTAC TACTGAATAT CCTGATCAAT GCCGTCCAGG CTATCAGTGC ACGAGGGAAA
ATTCGCATTC GAACCTGGCA ATACAGCGAC TCACAACAGG CCATTTCGAT AGAGGACAAC
GGCTGTGGCA TTGATCTCTC GCTGCAAAAA AAGATCTTCG ATCCCTTTTT CACCACCAAA
GCCTCAGGAA CCGGGCTTGG TCTGGCGTTA AGTCAACGCA TCATTAATGC CCATCAGGGT
GATATTCGCG TCGCCAGTTT GCCGGGCTAC GGCGCAACCT TCACGCTTAT TTTACCGATC
AACCCGCAGG GAAATCAGAC TGTATGA
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| Protein sequence | MHYMKWIYPR RLRNQMILMA ILMVIVPTLT IGYIVETEGR SAVLSEKEKK LSAVVNLLNQ
ALGDRYDLYI DLPREERIRA LNAELAPITE NITHAFPGIG AGYYNKTLDA IITYAPSALY
QNNVGVTIAA DHPGREVMRT NTPLVYSGRQ VRGDILNSMI PIERNGEILG YIWANELTED
IRRQAWKMDV RIIIVLTAGL LISLLLIVLF SRRLSANIDI ITDGLSTLAQ NIPTRLPQLP
GEMGQISQSV NNLAQALRET RTLNDLIIEN AADGVIAIDR QGDVTTMNPA AEVITGYQRH
ELVGQPYSML FDNTQFYSPV LDTLEHGTEH VALEISFPGR DRTIELSVTT SRIHNTHGEM
IGALVIFSDL TARKETQRRM AQAERLATLG ELMAGVAHEV RNPLTAIRGY VQILRQQTSD
LIHQEYLSVV LKEIDSINKV IQQLLEFSRP RHSQWQQVSL NALVEETLVL VQTAGVQARV
DFISELDNEL SPINADRELL KQVLLNILIN AVQAISARGK IRIRTWQYSD SQQAISIEDN
GCGIDLSLQK KIFDPFFTTK ASGTGLGLAL SQRIINAHQG DIRVASLPGY GATFTLILPI
NPQGNQTV
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