| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2361 |
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| Symbol | alkB |
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| ID | 6142981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2392411 |
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| End bp | 2393061 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617234 |
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| Product | alkylated DNA repair protein AlkB |
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| Protein accession | YP_001744406 |
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| Protein GI | 170682238 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGGATC TGTTTGCCGA TGCTGAACCG TGGCAAGAGC CACTGGCGGC TGGTGCGGTA
ATTTTACGGC GTTTCGCTTT TAACGCTGCG GAGCAACTAA TCCGCGATAT TAATGACGTT
GCCAGCCAGT CGCCGTTTCG CCAGATGGTC ACTCCAGGCG GATATACCAT GTCGGTGGCG
ATGACCAACT GTGGGCATCT GGGCTGGACG ACCCATCGGC AAGGTTATCT CTATTCGCCC
ATTGATCCGC AAACAAATAA ACCGTGGCCC GCCATGCCGC AGAGTTTTCA TCATTTATGT
CAACGTGCGG CTACGGCGGG GGGCTATCCA GATTTCCAGC CAGATGCCTG TTTGATCAAC
CGCTACGTTC CTGGCGCGAA ACTGTCGCTG CATCAGGATA AAGACGAACC GGATCTGCGC
GCGCCAATTG TTTCTGTTTC TCTGGGCTTA CCCGCGATTT TTCAATTTGG CGGCCTGAAA
CGAAATGATC CGCTAAAAAG ATTGTTGCTG GAACATGGCG ATGTGGTGGT ATGGGGCGGT
GAATCGCGGC TGTTTTATCA TGGCATTCAA CCGTTGAAAG CGGGGTTTCA TCCACTCGCC
GGCGACTGCC GCTACAACCT GACATTCCGT CAGGCAGGTA AAAAAGAATA A
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| Protein sequence | MLDLFADAEP WQEPLAAGAV ILRRFAFNAA EQLIRDINDV ASQSPFRQMV TPGGYTMSVA
MTNCGHLGWT THRQGYLYSP IDPQTNKPWP AMPQSFHHLC QRAATAGGYP DFQPDACLIN
RYVPGAKLSL HQDKDEPDLR APIVSVSLGL PAIFQFGGLK RNDPLKRLLL EHGDVVVWGG
ESRLFYHGIQ PLKAGFHPLA GDCRYNLTFR QAGKKE
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