| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2347 |
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| Symbol | ccmC |
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| ID | 6145940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2379868 |
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| End bp | 2380605 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641617220 |
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| Product | heme exporter protein C |
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| Protein accession | YP_001744392 |
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| Protein GI | 170683112 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.700588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGAAAA CACTGCATCA ACTGGCGATC CCACCACGGC TGTATCAAAT CTGTGGCTGG
TTTATACCGT GGCTGGCAAT TGCCAGTGTG GTCGTGCTTA CCGTCGGCTG GATCTGGGGA
TTCGGCTTTG CTCCGGCTGA TTATCAGCAG GGAAATAGCT ACCGCATTAT CTACCTGCAT
GTGCCTGCGG CGATCTGGTC GATGGGCATT TATGCATCAA TGGCGGTGGC GGCGTTTATT
GGCCTTGTCT GGCAGATGAA AATGGCCAAC CTGGCGGTGG CGGCGATGGC CCCCATTGGT
GCCGTGTTTA CCTTTATTGC CCTGGTTACC GGCTCTGCAT GGGGAAAACC GATGTGGGGC
ACCTGGTGGG TATGGGATGC ACGTCTGACT TCTGAACTGG TGCTGCTGTT TTTGTATGTG
GGTGTGATTG CCCTGTGGCA CGCCTTCGAC GACCGCCGTC TGGCGGGCCG TGCGGCAGGT
ATCCTGGTGC TGATTGGCGT GGTGAATCTG CCGATTATTC ATTACTCCGT GGAGTGGTGG
AACACCCTGC ACCAGGGATC AACGCGGATG CAGCAAAGTA TCGATCCGGC GATGCGTTCG
CCGCTGCGCT GGTCGATTTT TGGCTTCCTG CTCCTGTCTG CCACGCTGAC GCTGATGCGG
ATGCGTAATT TGATTTTGCT GATGGAAAAA CGCCGTCCGT GGGTGAGTGA ACTGATACTG
AAAAGAGGCC GTAAATGA
|
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| Protein sequence | MWKTLHQLAI PPRLYQICGW FIPWLAIASV VVLTVGWIWG FGFAPADYQQ GNSYRIIYLH
VPAAIWSMGI YASMAVAAFI GLVWQMKMAN LAVAAMAPIG AVFTFIALVT GSAWGKPMWG
TWWVWDARLT SELVLLFLYV GVIALWHAFD DRRLAGRAAG ILVLIGVVNL PIIHYSVEWW
NTLHQGSTRM QQSIDPAMRS PLRWSIFGFL LLSATLTLMR MRNLILLMEK RRPWVSELIL
KRGRK
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