| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2343 |
|---|
| Symbol | dsbE |
|---|
| ID | 6144617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2376692 |
|---|
| End bp | 2377249 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641617216 |
|---|
| Product | thiol:disulfide interchange protein DsbE |
|---|
| Protein accession | YP_001744388 |
|---|
| Protein GI | 170684059 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.439833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCA AAGTATTGTT AATTCCGTTG ATTATCTTCC TGGCGATTGC CGCGGCGCTG
CTGTGGCAGC TGGCGCGTAA TGCCGAAGGG GATGATCCGA CCAATCTGGA ATCGGCGCTC
ATTGGCAAGC CAGTGCCGAA GTTTCGCCTC GAATCACTGG ACAATCCGGG GCAGTTTTAT
CAGGCGGATG TGCTGACTCA GGGCAAACCT GTGCTGCTTA ACGTCTGGGC GACCTGGTGT
CCGACCTGCC GTGCGGAACA TCAATATCTG AATCAGCTTT CTGCGCAGGG CATTCGCGTG
GTCGGCATGA ACTATAAAGA CGATCGCCAG AAGGCAATCA GCTGGCTGAA AGAGCTGGGC
AATCCTTACG CACTAAGCCT GTTTGATGGC GACGGCATGT TAGGGCTGGA TCTCGGTGTC
TATGGCGCGC CAGAAACGTT CCTCATCGAC GGCAACGGCA TCATTCGCTA TCGCCATGCG
GGCGATCTCA ATCCTCGCGT CTGGGAAGAA GAGATCAAGC CGCTGTGGGA GAAATACAGT
AAGGAGGCCG CACAATGA
|
|---|
| Protein sequence | MKRKVLLIPL IIFLAIAAAL LWQLARNAEG DDPTNLESAL IGKPVPKFRL ESLDNPGQFY
QADVLTQGKP VLLNVWATWC PTCRAEHQYL NQLSAQGIRV VGMNYKDDRQ KAISWLKELG
NPYALSLFDG DGMLGLDLGV YGAPETFLID GNGIIRYRHA GDLNPRVWEE EIKPLWEKYS
KEAAQ
|
|---|
| |