Gene EcSMS35_2331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2331 
Symbolbcr 
ID6146856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2364229 
End bp2365419 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content53% 
IMG OID641617205 
Productbicyclomycin/multidrug efflux system 
Protein accessionYP_001744378 
Protein GI170683634 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.369879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0197956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCC GACAGCATTC GTCGTTTGCT ATTGTTTTTA TCCTTGGCCT GCTGGCCATG 
TTGATGCCGC TGTCGATTGA TATGTATCTG CCTGCGCTAC CGGTAATTTC AGCGCAGTTT
GGTGTACCGG CGGGCAGTAC GCAGATGACC CTCAGTACTT ATATTCTGGG CTTTGCGTTG
GGGCAGTTAA TCTACGGGCC GATGGCAGAC AGCTTCGGGC GTAAGCCGGT GGTTCTTGGC
GGTACGCTGG TGTTTGCCGC CGCCGCGGTG GCGTGTGCGT TGGCACAAAC CATCGATCAG
CTGATTGTGA TGCGTTTCTT CCACGGGCTG GCTGCGGCTG CGGCCAGCGT GGTTATCAAC
GCTTTGATGC GTGATATCTA CCCGAAAGAA GAGTTCTCGC GGATGATGTC GTTTGTCATG
CTGGTGACGA CCATTGCACC GCTGATGGCA CCGATAGTTG GCGGCTGGGT GCTGGTGTGG
CTGAGCTGGC ATTACATCTT CTGGATCCTC GCTGTGGCGG CGATTCTGGC TTCGGCAATG
ATCTTCTTTC TGATCAAAGA AACCTTACCA CCGGAGCGTC GCCAGCCTTT TCACATTCGT
ACTACTATTG GTAACTTTGC GGCGCTGTTC CGTCATAAGC GTGTCCTGAG TTATATGCTT
GCCAGTGGTT TCAGCTTTGC CGGGATGTTC TCGTTCTTAA GCGCCGGACC GTTTGTCTAC
ATTGAAATTA ACCACGTCGC GCCGGAAAAC TTTGGTTATT ACTTTGCGCT AAACATTGTT
TTTCTGTTCG TGATGACTAT CTTTAACAGC CGCTTCGTTC GCCGTATTGG CGCGTTAAAT
ATGTTCCGCT CGGGGTTGTG GATACAGTTT ATTATGGCGG CGTGGATGGT CATCAGTGCG
CTGCTGGGGC TGGGATTCTG GTCGCTGGTG GTTGGCGTTG CGGCGTTTGT GGGCTGCGTG
TCGATGGTGT CATCCAATGC GATGGCGGTC ATTCTTGATG AGTTTCCCCA TATGGCGGGA
ACGGCATCTT CGCTGGCAGG AACCTTCCGT TTCGGCATAG GGGCAATTGT TGGCGCATTA
CTTTCTCTTG CGACCTTTAA CTCTGCATGG CCGATGATTT GGTCAATTGC ATTCTGCGCA
ACCAGTTCCA TTCTCTTCTG TCTGTACGCC AGTCGGCCGA AAAAACGGTG A
 
Protein sequence
MTTRQHSSFA IVFILGLLAM LMPLSIDMYL PALPVISAQF GVPAGSTQMT LSTYILGFAL 
GQLIYGPMAD SFGRKPVVLG GTLVFAAAAV ACALAQTIDQ LIVMRFFHGL AAAAASVVIN
ALMRDIYPKE EFSRMMSFVM LVTTIAPLMA PIVGGWVLVW LSWHYIFWIL AVAAILASAM
IFFLIKETLP PERRQPFHIR TTIGNFAALF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY
IEINHVAPEN FGYYFALNIV FLFVMTIFNS RFVRRIGALN MFRSGLWIQF IMAAWMVISA
LLGLGFWSLV VGVAAFVGCV SMVSSNAMAV ILDEFPHMAG TASSLAGTFR FGIGAIVGAL
LSLATFNSAW PMIWSIAFCA TSSILFCLYA SRPKKR