Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2331 |
Symbol | bcr |
ID | 6146856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2364229 |
End bp | 2365419 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617205 |
Product | bicyclomycin/multidrug efflux system |
Protein accession | YP_001744378 |
Protein GI | 170683634 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.369879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0197956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCC GACAGCATTC GTCGTTTGCT ATTGTTTTTA TCCTTGGCCT GCTGGCCATG TTGATGCCGC TGTCGATTGA TATGTATCTG CCTGCGCTAC CGGTAATTTC AGCGCAGTTT GGTGTACCGG CGGGCAGTAC GCAGATGACC CTCAGTACTT ATATTCTGGG CTTTGCGTTG GGGCAGTTAA TCTACGGGCC GATGGCAGAC AGCTTCGGGC GTAAGCCGGT GGTTCTTGGC GGTACGCTGG TGTTTGCCGC CGCCGCGGTG GCGTGTGCGT TGGCACAAAC CATCGATCAG CTGATTGTGA TGCGTTTCTT CCACGGGCTG GCTGCGGCTG CGGCCAGCGT GGTTATCAAC GCTTTGATGC GTGATATCTA CCCGAAAGAA GAGTTCTCGC GGATGATGTC GTTTGTCATG CTGGTGACGA CCATTGCACC GCTGATGGCA CCGATAGTTG GCGGCTGGGT GCTGGTGTGG CTGAGCTGGC ATTACATCTT CTGGATCCTC GCTGTGGCGG CGATTCTGGC TTCGGCAATG ATCTTCTTTC TGATCAAAGA AACCTTACCA CCGGAGCGTC GCCAGCCTTT TCACATTCGT ACTACTATTG GTAACTTTGC GGCGCTGTTC CGTCATAAGC GTGTCCTGAG TTATATGCTT GCCAGTGGTT TCAGCTTTGC CGGGATGTTC TCGTTCTTAA GCGCCGGACC GTTTGTCTAC ATTGAAATTA ACCACGTCGC GCCGGAAAAC TTTGGTTATT ACTTTGCGCT AAACATTGTT TTTCTGTTCG TGATGACTAT CTTTAACAGC CGCTTCGTTC GCCGTATTGG CGCGTTAAAT ATGTTCCGCT CGGGGTTGTG GATACAGTTT ATTATGGCGG CGTGGATGGT CATCAGTGCG CTGCTGGGGC TGGGATTCTG GTCGCTGGTG GTTGGCGTTG CGGCGTTTGT GGGCTGCGTG TCGATGGTGT CATCCAATGC GATGGCGGTC ATTCTTGATG AGTTTCCCCA TATGGCGGGA ACGGCATCTT CGCTGGCAGG AACCTTCCGT TTCGGCATAG GGGCAATTGT TGGCGCATTA CTTTCTCTTG CGACCTTTAA CTCTGCATGG CCGATGATTT GGTCAATTGC ATTCTGCGCA ACCAGTTCCA TTCTCTTCTG TCTGTACGCC AGTCGGCCGA AAAAACGGTG A
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Protein sequence | MTTRQHSSFA IVFILGLLAM LMPLSIDMYL PALPVISAQF GVPAGSTQMT LSTYILGFAL GQLIYGPMAD SFGRKPVVLG GTLVFAAAAV ACALAQTIDQ LIVMRFFHGL AAAAASVVIN ALMRDIYPKE EFSRMMSFVM LVTTIAPLMA PIVGGWVLVW LSWHYIFWIL AVAAILASAM IFFLIKETLP PERRQPFHIR TTIGNFAALF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY IEINHVAPEN FGYYFALNIV FLFVMTIFNS RFVRRIGALN MFRSGLWIQF IMAAWMVISA LLGLGFWSLV VGVAAFVGCV SMVSSNAMAV ILDEFPHMAG TASSLAGTFR FGIGAIVGAL LSLATFNSAW PMIWSIAFCA TSSILFCLYA SRPKKR
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