Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2313 |
Symbol | |
ID | 6146806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2344012 |
End bp | 2344953 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641617187 |
Product | hypothetical protein |
Protein accession | YP_001744360 |
Protein GI | 170680599 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0218939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.000211753 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCGAAA AGGATTATGT CGTAATTATA GGTTCGGCGA ATATTGATGT CGCCGGATAT TCACATGAAT CATTAAATTA TGCGGATTCA AATCCAGGTA AAATAAAATT TACGCCTGGT GGGGTAGGGC GCAATATTGC ACAAAACCTG GCGTTGCTGG GTAATAAAGC CTGGCTACTG AGCGCCGTAG GCAGTGATTT TTATGGCCAA TCGCTGCTAA CGCAAACCAA TCAATCTGGC GTTTATGTCG ATAAATGCCT GATTGTGCCG GGAGAAAATA CGTCGAGCTA TTTATCATTA CTCGATAATA CCGGTGAAAT GCTGGTTGCT ATAAATGACA TGAATATTAG CAACGCTATT ACAGCTGAAT ATCTCGCACA GCACCGTGAA TTTATTCAGA GGGCAAAGGT CATTGTCGCG GACTGTAATA TCAGTGAAGA GGCACTGGCA TGGATTCTGG ATAATGCCGC CAACGTACCC GTATTTGTCG ATCCGGTTTC AGCGTGGAAA TGTGTCAAAG TGCGCGACCG TCTAAATCAA ATCCACACTC TCAAGCCAAA CCGCCTTGAA GCGGAAACCC TGAGTGGGAT TGCGCTGTCA GGGCGTGAAG ATGTGGCAAA GGTTGCCGCC TGGTTCCATC AACATGGCCT GAACCGACTG GTATTGAGCA TGGGCGGCGA CGGCGTTTAT TACAGTGATA TCAGCGGTGA AAGTGGTTGG TCTGCGCCGA TCAAAACCAA TGTCATTAAT GTTACCGGAG CGGGCGATGC CATGATGGCG GGACTTGCTT CGTGTTGGGT AGACGGAATG CCGTTTGCCG AATCTGTTCG TTTCGCACAG GGATGTTCGT CAATGGCGCT CTCCTGTGAA TACACCAATA ACCCCGATTT ATCGATTGCC AACGTTATAT CGTTAGTGGA GAACGTAGAA TGTCTGAATT AA
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Protein sequence | MREKDYVVII GSANIDVAGY SHESLNYADS NPGKIKFTPG GVGRNIAQNL ALLGNKAWLL SAVGSDFYGQ SLLTQTNQSG VYVDKCLIVP GENTSSYLSL LDNTGEMLVA INDMNISNAI TAEYLAQHRE FIQRAKVIVA DCNISEEALA WILDNAANVP VFVDPVSAWK CVKVRDRLNQ IHTLKPNRLE AETLSGIALS GREDVAKVAA WFHQHGLNRL VLSMGGDGVY YSDISGESGW SAPIKTNVIN VTGAGDAMMA GLASCWVDGM PFAESVRFAQ GCSSMALSCE YTNNPDLSIA NVISLVENVE CLN
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