Gene EcSMS35_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2313 
Symbol 
ID6146806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2344012 
End bp2344953 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content47% 
IMG OID641617187 
Producthypothetical protein 
Protein accessionYP_001744360 
Protein GI170680599 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0218939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000211753 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCGAAA AGGATTATGT CGTAATTATA GGTTCGGCGA ATATTGATGT CGCCGGATAT 
TCACATGAAT CATTAAATTA TGCGGATTCA AATCCAGGTA AAATAAAATT TACGCCTGGT
GGGGTAGGGC GCAATATTGC ACAAAACCTG GCGTTGCTGG GTAATAAAGC CTGGCTACTG
AGCGCCGTAG GCAGTGATTT TTATGGCCAA TCGCTGCTAA CGCAAACCAA TCAATCTGGC
GTTTATGTCG ATAAATGCCT GATTGTGCCG GGAGAAAATA CGTCGAGCTA TTTATCATTA
CTCGATAATA CCGGTGAAAT GCTGGTTGCT ATAAATGACA TGAATATTAG CAACGCTATT
ACAGCTGAAT ATCTCGCACA GCACCGTGAA TTTATTCAGA GGGCAAAGGT CATTGTCGCG
GACTGTAATA TCAGTGAAGA GGCACTGGCA TGGATTCTGG ATAATGCCGC CAACGTACCC
GTATTTGTCG ATCCGGTTTC AGCGTGGAAA TGTGTCAAAG TGCGCGACCG TCTAAATCAA
ATCCACACTC TCAAGCCAAA CCGCCTTGAA GCGGAAACCC TGAGTGGGAT TGCGCTGTCA
GGGCGTGAAG ATGTGGCAAA GGTTGCCGCC TGGTTCCATC AACATGGCCT GAACCGACTG
GTATTGAGCA TGGGCGGCGA CGGCGTTTAT TACAGTGATA TCAGCGGTGA AAGTGGTTGG
TCTGCGCCGA TCAAAACCAA TGTCATTAAT GTTACCGGAG CGGGCGATGC CATGATGGCG
GGACTTGCTT CGTGTTGGGT AGACGGAATG CCGTTTGCCG AATCTGTTCG TTTCGCACAG
GGATGTTCGT CAATGGCGCT CTCCTGTGAA TACACCAATA ACCCCGATTT ATCGATTGCC
AACGTTATAT CGTTAGTGGA GAACGTAGAA TGTCTGAATT AA
 
Protein sequence
MREKDYVVII GSANIDVAGY SHESLNYADS NPGKIKFTPG GVGRNIAQNL ALLGNKAWLL 
SAVGSDFYGQ SLLTQTNQSG VYVDKCLIVP GENTSSYLSL LDNTGEMLVA INDMNISNAI
TAEYLAQHRE FIQRAKVIVA DCNISEEALA WILDNAANVP VFVDPVSAWK CVKVRDRLNQ
IHTLKPNRLE AETLSGIALS GREDVAKVAA WFHQHGLNRL VLSMGGDGVY YSDISGESGW
SAPIKTNVIN VTGAGDAMMA GLASCWVDGM PFAESVRFAQ GCSSMALSCE YTNNPDLSIA
NVISLVENVE CLN