| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2311 |
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| Symbol | |
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| ID | 6143241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2341742 |
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| End bp | 2342992 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641617185 |
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| Product | NupC family nucleoside transporter |
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| Protein accession | YP_001744358 |
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| Protein GI | 170681919 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0705452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000255025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATATAA TGAGAAGTGT TGTGGGGATG GTGGTGTTAC TGGCAATAGC ATTTTTGTTG
TCAGTGAATA AAAAGAGCAT CAGTTTGCGC ACGGTTGGAG CCGCGTTGCT GCTACAAATC
GCCATTGGCG GAATCATGCT CTATTTTCCA CCAGGAAAAT GGGCGGTAGA ACAGGCGGCA
TTAGGCGTTC ATAAAGTGAT GTCTTACAGT GATGCCGGTA GCGCCTTCAT TTTTGGTTCG
CTGGTTGGGC CGAAAATGGA TGTCCTCTTT GACGGTGCGG GTTTTATCTT CGCCTTTCGC
GTACTCCCGG CGATTATCTT CGTCACTGCG CTCATTAGTC TGCTGTACTA CATTGGCGTG
ATGGGGCTGC TGATTCGCAT CCTTGGCAGC ATTTTCCAGA AAGCCCTCAA CATCAGCAAA
ATCGAATCTT TTGTTGCGGT TACCACTATT TTCCTCGGGC AAAATGAGAT CCCGGCGATC
GTTAAACCGT TTATCGATCG CATGAATCGC AACGAGTTGT TTACCGCAAT TTGTAGCGGG
ATGGCGTCCA TTGCGGGTTC GATGATGATT GGTTATGCCG GAATGGGCGT ACCAATTGAC
TACCTGTTAG CGGCATCGCT GATGGCGATC CCTGGCGGGA TTTTGTTTGC ACGTATTCTT
AGCCCGGCAA CCGAGCCTTC GCAGGTCACA TTTGAAAATT TATCGTTCAG CGAAACGCCG
CCAAAAAGCT TTATCGAAGC GGCGGCGAGC GGTGCGATGA CCGGGCTGAA AATCGCCGCT
GGTGTGGCGA CGGTGGTAAT GGTATTTGTG GCAATTATTG CGCTGATCAA CGGCATTATC
GGCGGAATTG GCGGCTGGTT TGGCTTCGCC AATGCTTCTC TGGAAAGTAT TTTTGGCTAT
GTGCTGGCAC CGCTGGCGTG GATCATGGGT GTGGACTGGA GTGATGCCAA CCTTGCGGGT
AGCCTGATTG GGCAGAAACT GGCAATTAAC GAATTCGTCG CTTACCTGAG TTTCTCCCCA
TACCTGCAAA CGGGCGGCAC GCTGGAAGTG AAAACCATTG CGATTATCTC CTTTGCGCTT
TGTGGTTTTG CTAACTTTGG TTCTATCGGT GTTGTCGTTG GGGCATTTTC GGCTATTTCG
CCAAAACGCG CACCGGAAAT CGCTCAGCTT GGTTTACGGG CGCTGGCAGC AGCAACGCTT
TCCAACCTGA TGAGCGCGAC CATTGCCGGG TTCTTTATTG GTTTAGCTTG A
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| Protein sequence | MDIMRSVVGM VVLLAIAFLL SVNKKSISLR TVGAALLLQI AIGGIMLYFP PGKWAVEQAA
LGVHKVMSYS DAGSAFIFGS LVGPKMDVLF DGAGFIFAFR VLPAIIFVTA LISLLYYIGV
MGLLIRILGS IFQKALNISK IESFVAVTTI FLGQNEIPAI VKPFIDRMNR NELFTAICSG
MASIAGSMMI GYAGMGVPID YLLAASLMAI PGGILFARIL SPATEPSQVT FENLSFSETP
PKSFIEAAAS GAMTGLKIAA GVATVVMVFV AIIALINGII GGIGGWFGFA NASLESIFGY
VLAPLAWIMG VDWSDANLAG SLIGQKLAIN EFVAYLSFSP YLQTGGTLEV KTIAIISFAL
CGFANFGSIG VVVGAFSAIS PKRAPEIAQL GLRALAAATL SNLMSATIAG FFIGLA
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