Gene EcSMS35_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2305 
Symbol 
ID6146885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2335428 
End bp2336477 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content53% 
IMG OID641617179 
Producthypothetical protein 
Protein accessionYP_001744352 
Protein GI170681096 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00169786 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGAATA TCACCTTACA GAAACAACAT CGTACACTGT GGCATTTTAT TCCGGGGTTA 
GCCCTGAGTG CAGTTATCAC CGGGGTCGCC CTGTGGGGTG GTTCCATTCC CGCGGTTGCG
GGTGCCGGGT TTAGTGCCCT CACCCTCGCA ATTTTGTTGG GGATGGTTTT AGGCAACACC
ATCTATCCGC ACATCTGGAA AAGCTGTGAC GGTGGCGTGC TGTTTGCCAA GCAATATTTA
TTACGTCTGG GTATCATTCT TTATGGCTTC CGTCTGACGT TCTCGCAAAT TGCCGATGTC
GGTATCAGTG GGATCATCAT TGACGTGTTG ACGCTGTCCA GTACCTTCCT GCTGGCTTGC
TTCCTGGGGC AGAAAGTGTT TGGTCTGGAT AAGCACACGA GCTGGTTGAT CGGTGCCGGT
AGCAGTATCT GTGGTGCTGC CGCGGTACTG GCGACTGAGC CGGTAGTGAA AGCAGAAGCC
AGTAAAGTAA CCGTGGCTGT TGCAACCGTT GTTATCTTCG GGACCGTCGC GATTTTCCTC
TACCCGGCGA TATATCCGCT GATGTCTCAA TGGTTTAGTC CGGAAACTTT CGGTATCTAC
ATTGGTTCTA CTGTGCACGA AGTGGCGCAG GTGGTGGCGG CAGGTCATGC CATCAGCCCG
GATGCAGAAA ACGCAGCAGT TATTTCCAAA ATGCTGCGCG TGATGATGCT GGCTCCGTTC
CTCATCCTGC TGGCGGCGCG TGTTAAACAG CTGTCTGGGG CGAACAGCGG CGAGAAAAGC
AAAATCACTA TTCCGTGGTT TGCCATCTTG TTCATCGTAG TTGCCATCTT TAACTCGTTC
CACCTGTTAC CGCAGAGCGT AGTGAATATG CTGGTAACGC TGGATACCTT CCTGCTGGCA
ATGGCGATGG CGGCGCTGGG TCTGACCACT CACGTCAGCG CGCTGAAAAA AGCCGGGGCG
AAACCTCTGC TGATGGCTCT GGTACTGTTT GCCTGGCTGA TTGTTGGTGG TGGTGCGATT
AACTATGTGA TTCAAAGCGT CATCGCATAA
 
Protein sequence
MTNITLQKQH RTLWHFIPGL ALSAVITGVA LWGGSIPAVA GAGFSALTLA ILLGMVLGNT 
IYPHIWKSCD GGVLFAKQYL LRLGIILYGF RLTFSQIADV GISGIIIDVL TLSSTFLLAC
FLGQKVFGLD KHTSWLIGAG SSICGAAAVL ATEPVVKAEA SKVTVAVATV VIFGTVAIFL
YPAIYPLMSQ WFSPETFGIY IGSTVHEVAQ VVAAGHAISP DAENAAVISK MLRVMMLAPF
LILLAARVKQ LSGANSGEKS KITIPWFAIL FIVVAIFNSF HLLPQSVVNM LVTLDTFLLA
MAMAALGLTT HVSALKKAGA KPLLMALVLF AWLIVGGGAI NYVIQSVIA